Thermobispora bispora: Tbis_1480
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Entry
Tbis_1480 CDS
T01236
Name
(GenBank) pentapeptide repeat protein
Organism
tbi
Thermobispora bispora
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Pentapeptide
NBCH_WD40
NACHT
PQQ_2
PROPPIN
AAA_22
nSTAND1
AAA
Pentapeptide_4
RMC1_N
Metallophos
AAA_16
AAA_7
TsaE
Motif
Other DBs
NCBI-ProteinID:
ADG88198
UniProt:
D6YA55
LinkDB
All DBs
Position
complement(1678561..1683984)
Genome browser
AA seq
1807 aa
AA seq
DB search
MAGGVRADPDNPSSKLVTVRLEDVPLEGLLGTITWIDLVGVTDAEEARRLLLTRIQQALV
GRAKPAKRPGFPLDPETPAAHAVVDAVSGPQLRRTPVAPPPFPTADRPASADSITLLHIA
GPRFGRGLPKGDEPLEAGELQASIWGDLTRLADAGAPRPDLLIVTGDLTESGVPREYEQA
LGFLTGLRVLLGLEANRLIIVPGPRDVNKKACEAYFTGCEADDVRPTPPYWPKWKHFASL
FKELYQGLDGTIFDTAQPWTLFELPELRTVVAGLNSTIAMSHRAEDDYGLVGKAQAAWFA
ERLRPHGDRLRIGVIAHPPDRLRDSESLQRLLGSRLDLLVHGHDPRDGATEEVWEFGGRP
CVPALAPGHHQLIEITPEGLRRWTRGGGRDPLVTGRPQILPYRLLRRPGASPAPPEPAED
APGEPTQADDPAARLLDRIIEVCRARFERAKIRRVDGDPPYLLVTHAEDGFVRQFLIGAH
AGAVTREQVETFLSLVHTIGLEHGSELVYQGPTPPQALRNEALRRGLRLRSFTEFQGLLD
LSDHVAKQTRRLNADRRYPPELYVPQRFRFRELGRSDGAIRDDLTGELMRLLAGDHGRFI
LLLGDFGTGKTFAMRELARRIPSELPHLTPLLIELRNLDKSQAVDSLVASHLTNHGEELI
DVKAFHYMLRQGRIVLLLDGFDELVTRVTYERAADHLDTLLQAAEDKAKIVVAARTQHFQ
SRGQVMTALGERVERLPTHRVLSIEGFTTEQIRAFLVNRYGSQQAADDRMTLLGGISNLL
DLASNPRMLSFIADLPEERVRAVAQAGGTISAASLYQEILDHWLRHEESRTRLAGAPGGL
TLDELWRAVTTLAVRLWKTGETYLERSELDDVAATLLTELTDDEAEAGARMSVGQTVHAI
GSGSLLVRTDEGLFGFIHESVAEWLVARHLAHHLKELSLRPLSELTIEFLCDLAKGAELQ
AWAARTLASPDAGVAARANALKVTNRLRTAARTDLRGALLRGEDLSHRDLSGVDLTGADL
TEAQLVRANLERAVLRNARLIGARLDNAKLAGADLTGADLTRARLMRADVRDVVITGSRW
DRAAVIDATGVPDGAPELYGAAIAPRPDTDDQVEVQVAPQSVGVQSGFHDQPVRLPEPVA
YRPDGGVFAVGGDDGGVLICEAATGNPLRTLRGHRGRVYKVAYGSAGLLTGASDGTVRIW
DPHTGEMRHVLQGNPNGAWPVALFGDLVAAGGADGVVRVWSAGELMLELRGHTPPINGAV
FLRGRLITGDADGTIRVWDLSTGKVRHELRGHSGALYRLVLSPERRLLAAGDGQGVLCLW
DPYTGELLHRLTGHPGGICAIAFHPDGHALVSGDTEGTVRLWDPHTGQLMGTLSGHEGAI
YHVAFSPSGELFVTGDSEGVVRVWSASGEQLAELSGHRGSVWPFAFHPKGHRLVTSSSDG
MIRLWDPRTGRCRRVLRGHGRRINSVAFSADGRMLAACGSDGYVRLWDPQTGRRIRSFTG
TGDRLESAVFSPAGSLLATTSNDGGVYLWDPTSDGYARELNVDTDHVWAQAFTPDGTRLA
TANDDDSVRVWHRASGRQELHLTEHRGRVRSIAFSPDGRLIVTGCDDRIVRLWDMVTGEC
TATLSGHKDRVYAVAFHPSGELVASASNDGTARLWRVPSGDCLHVLEHGGGRLWTAAFSP
DGNLLATAGDDLAIRLWDPARGVQLHALTGHTKRISSVAFHPSGELLASAGDDGLVILWD
LAGPRQRATLLGLPEGWAAFTPTGLYKSEGEVAGQFWYVIDLCRFEPGELDGYLPGVRRL
RPEEVLS
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcggcgtgcgcgccgatccggacaatccgtcgagcaagctggtgacagtgcgg
ctggaggacgtcccgctcgaaggcctgctcggcacgatcacctggatagacctcgtgggc
gtgaccgacgcggaggaggcgcggcggctcctgctgaccaggatccagcaggcgctggtc
ggccgggccaagcccgctaagcggcccggattcccgctcgatccggagaccccggccgcg
cacgccgtggtcgacgccgtcagcggccctcaactccggcgcaccccggtggccccgccc
cccttcccgacggcggaccggccggccagtgcggactcgatcaccctgctgcacatcgcc
gggccgcgcttcggccgtgggctgccgaagggcgacgaaccgctggaggcgggcgagctg
caggccagcatctggggtgacctcacccggctcgccgacgccggagcgccccggccggac
ctgctcatcgtgaccggcgacctcaccgagtccggggtcccacgtgagtacgagcaggcg
ctcggattcctgaccggactgcgggtgctgctcgggctggaggccaaccgcctgatcatc
gttcctggcccgcgggacgttaacaagaaggcctgcgaggcctatttcaccggctgcgag
gcggacgacgtgcgcccgacgccgccgtactggccgaagtggaagcacttcgccagcctg
ttcaaggagctctaccaagggctcgacggaacgatcttcgacaccgcccagccgtggacg
ctgttcgagctgcccgagctccgcaccgtggtggcgggtctcaactcgacgatcgcgatg
agccaccgcgcggaggacgactacggcctcgtcggcaaagcccaagcggcgtggttcgcc
gagcggctccggccgcacggcgatcggctgaggatcggtgtcatcgcccatcccccggac
cgcctccgtgactcagagagcctgcagcgtctgctcggctcccggctcgacctgctggtc
cacggccatgacccacgcgacggcgcaacggaggaggtctgggagttcggtggacggccg
tgcgtgcccgcgctcgcgcccggccaccaccagctcatcgagatcactccagagggcctg
cgccggtggacccgcggtggtggacgcgatcccctcgtcaccggacggccccagatcctg
ccgtaccgcctgctgcgccggcccggggcgtcgcccgccccgcccgagcccgctgaggac
gcccccggtgagcccactcaggccgatgatcctgccgcccggctgctcgaccggatcatt
gaggtctgccgggcccggttcgaacgggccaagatccgcagagtggacggcgaccctccc
tacctgctcgtcacccacgccgaggacggcttcgtccgccagttcctcatcggcgcccac
gccggcgccgtcacccgcgagcaggtggagacgttcctgagcctcgtgcacaccatcggc
ctggagcacggctccgagctcgtctaccaagggccgacgccgccccaggccctccgtaac
gaagcgctgcggcgcggtctgcggctgcgcagcttcacggagttccaagggctgctcgac
ctgtcggaccacgtggccaagcagacccggcggctgaacgccgatcggcgctacccgccc
gagctgtatgtgccgcagcggttccggttccgcgagctcggccggtccgacggcgcgatc
cgcgacgacctcaccggggagctgatgcggctgctcgccggcgaccacggcaggttcatc
ctgctcctcggcgacttcggcacgggcaagacattcgcgatgcgcgagctggcccgccgg
atccccagcgaactcccccacctcaccccgctgctgatcgagctgcgcaacctggacaag
tcgcaggcggtcgactctctggtcgcgtcgcacctgacgaaccacggcgaggagctgatc
gatgtcaaggcgtttcattacatgctccgccagggccggatcgtgctcctcctcgacggc
ttcgacgagctcgtcacccgggtcacctacgagcgggccgccgatcacctcgacaccctg
ctgcaggccgccgaggacaaggcgaagatcgtcgttgccgcccgtacccagcacttccaa
tcacgagggcaggtgatgaccgccctcggggaacgggtcgagcggctgccgacccatcgg
gtgctgagcatcgagggcttcaccaccgagcagatccgcgcctttctggtcaaccggtac
ggctcgcagcaggcggccgacgaccggatgacgctgttaggcggaatatccaacctgctc
gatctcgcgagcaacccccggatgctgagcttcatcgctgatctgccggaagaacgggtg
cgcgcggtcgcccaagccggggggacgatcagcgccgcatcgctctaccaggagattctg
gatcactggctgaggcacgaggagagccgcacccgcttggccggtgcgccgggcgggctc
acccttgacgagctgtggcgggcggtgaccacgctcgccgtgcggctgtggaagaccggc
gagacgtatctcgaacggtcggagctcgacgacgtcgcggcgaccctcctcaccgagctc
accgacgatgaggccgaggcgggcgcccgcatgtccgtgggccagacggtccacgcgatc
ggctcgggcagcctgctggtccgcacggacgagggattgttcgggttcatccacgaatcg
gtcgccgagtggctggtggcccggcacctggcgcaccacctcaaggaactgtccttgcgg
ccgttgtccgagctcaccatagagttcctctgcgacctggccaagggagcggagctccag
gcctgggcggcgcgcaccctcgcctccccggacgcgggcgtagcggcgcgcgctaacgcg
ctcaaggtgaccaaccggctgcgcaccgcggcccggaccgacctgcgcggagccctgctg
cggggcgaggacctctcgcaccgggatctctccggggtggatctcaccggcgcggacctc
actgaggcacagctggtccgcgcaaacctggagcgcgcggtgctgcgcaacgcccggctc
atcggcgcccggctggacaacgcgaaactcgccggggctgacctcaccggtgccgatctg
acccgagcgaggctcatgcgggccgatgtgcgggacgtcgtcatcactgggagccgatgg
gaccgggccgcggtcatcgacgcgaccggcgtcccggacggcgcacccgagctgtacggc
gcggccatcgcaccccgcccggacaccgatgatcaagtagaagtccaggtggcaccgcaa
tcggtcggcgtccagtccggattccacgaccagcccgtcaggctgcctgaaccggtggcg
taccgcccagatggaggagtcttcgccgtgggcggcgacgacggtggggtgctcatctgc
gaagcggcgaccggcaatccactgcgcaccctccgtggtcatcggggccgggtgtacaag
gtcgcgtacggctcggccgggctgttgaccggggcgagtgacggcacggtccggatatgg
gatccgcacaccggggagatgcggcatgttctccaggggaatccgaacggcgcctggccg
gtggccctcttcggcgacctggtcgcggccggcggtgccgacggcgtggtacgggtgtgg
tcagcgggtgagctcatgctggagctgcggggacacacgccgccgatcaacggcgcggtg
ttcctccgcgggcggctgatcacgggggacgcggacggcacgatccgggtctgggacctg
tccaccggaaaggtcaggcatgaactgcgtggtcacagcggggcgctctaccggctggtc
ctctccccggagcgccgcctcctcgccgcaggggacggtcagggagtgctgtgcctctgg
gatccctataccggtgagctcctccatcggctcaccggtcaccctggtggaatctgcgcc
atcgccttccacccggacggtcacgcgctcgtctccggcgacaccgagggaaccgtccgg
ctgtgggatccccacaccggacagctcatgggcacgctcagcggccacgagggcgcgatc
taccatgtggcgttcagcccgtccggtgagctgttcgtgaccggagacagcgagggtgtc
gtccgggtctggtcggcgagcggcgagcagctcgccgagctcagcgggcaccggggctcg
gtttggccgttcgccttccatcccaagggacaccggctcgtgaccagcagcagcgacggc
atgatccggctgtgggatccgcgcactgggcggtgccggcgggtactgcgcggccacggc
cgccggatcaactcggtggcgttctccgccgacggccgtatgctcgccgcctgcggtagc
gacggctatgtgcggctgtgggacccacagaccgggcgccggatccggtcgttcaccggg
accggggaccggttggagtcggccgtgttcagtccggccgggtccctgctcgccaccacc
agcaacgacgggggcgtgtatctctgggatccgacgtcagacggctatgcgcgcgagctc
aacgtggacaccgatcacgtgtgggcgcaggcgttcaccccggacggcacccggctcgcc
accgccaacgacgacgacagtgtccgggtgtggcaccgcgccagcggacgacaggagctc
cacctcaccgagcaccggggccgggtccgctcgatcgcgttcagccctgacggccgcctc
atagtgaccggctgcgatgatcgcatcgtccggctgtgggacatggtcacgggcgagtgc
acggcgacgctgtccgggcacaaggaccgggtatacgcggtcgccttccacccctccggc
gagctcgtggcgagcgcgagcaatgacggcaccgcccggctctggcgtgtcccctccggg
gactgcctccacgtactggagcacggcggaggacggctctggaccgccgccttcagcccg
gacggtaacctgctggcgaccgcgggcgacgacctcgccatccggctgtgggatccggcg
cgtggcgtacagctgcacgccctcaccgggcacaccaagcggatcagctccgtcgccttc
cacccctccggggaactgctcgccagcgcgggcgatgacggcctggtcatcctgtgggac
ctcgccggaccgcggcagcgggccacgctgctggggcttcccgaagggtgggccgcgttc
acgccgaccgggctgtacaagtccgaaggcgaggtcgccggccagttctggtacgtgatc
gatctgtgccggttcgaaccgggcgaactggacggctaccttcccggcgtccgccggctc
aggccggaggaagtgttgtcctga
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