Thermobispora bispora: Tbis_2023
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Entry
Tbis_2023 CDS
T01236
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
tbi
Thermobispora bispora
Pathway
tbi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tbis_2023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbi03400
]
Tbis_2023
Enzymes [BR:
tbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Tbis_2023
DNA repair and recombination proteins [BR:
tbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Tbis_2023
Prokaryotic type
Tbis_2023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
ADG88735
UniProt:
D6Y1X9
LinkDB
All DBs
Position
complement(2343899..2344603)
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AA seq
234 aa
AA seq
DB search
MGEFGELIGDPLDREFFDRPAEEVAPDLLGRVIAHGPVAVRLTEVEAYGLPGQDPASHVY
RGRTERNAVMFGAPGHLYVYFTYGMHHCANLVCLPEGTGSAVLLRAGEVIRGAEVARARR
AAAGNGNAVNGGTGDGGAGEGDAPPSGRSIPDRDLARGPARLAVALALTREHNGLDCCGS
GPVRVFTGEPVSPELIRSGPRVGVSAGREIPWRFWVDGHPTVSPYRPHVPRQRT
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaattcggagagctgatcggggacccgctcgaccgtgagttcttcgaccggccg
gccgaggaggtcgcgccggacctgctcggccgggtgatcgcgcacgggccggtcgcggtc
cggctcaccgaggtcgaggcgtacggcctgcccgggcaggacccggcctcgcacgtgtac
cgcgggcgcaccgagcggaacgcggtgatgttcggcgcgccgggccacctgtacgtgtac
ttcacctacggcatgcaccactgcgccaacctcgtgtgcctgccggagggcaccggctcg
gcggtgctgctccgcgctggcgaggtgatccgcggcgcggaggtggcccgggcccgccgg
gccgcggcgggcaacgggaacgcggtcaacgggggcaccggtgacgggggagccggggag
ggggacgccccgcccagcgggcggagcatccccgaccgggacctcgcccgggggccggcc
cggctcgccgtcgccctcgcgctcacccgggagcacaacgggctcgactgctgcggctcc
gggccggtccgggtcttcaccggggagccggtctcccccgagctgatccggagcgggccg
cgcgtcggcgtctcggccgggcgggagatcccctggcggttctgggtggacggccacccg
accgtgtcgccgtaccgcccgcacgtgccccgtcagcgcacgtag
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