Thermobispora bispora: Tbis_2266
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Entry
Tbis_2266 CDS
T01236
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tbi
Thermobispora bispora
Brite
KEGG Orthology (KO) [BR:
tbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tbi03016
]
Tbis_2266
Enzymes [BR:
tbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Tbis_2266
Transfer RNA biogenesis [BR:
tbi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Tbis_2266
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Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADG88976
UniProt:
D6Y3A1
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All DBs
Position
2631157..2632368
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AA seq
403 aa
AA seq
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MTQPHVEPLLEPRDGIPPVIETWPELSAAVDAFARGTGPVAMDAERASGYRYSGRAYLVQ
LRREGAGTALIDPVACPDLGELDRVLADAEIVLHAATQDLPCLAELGFRPRRLFDTELAA
RLLGYERVGLATMVEVVLGLRLEKGHSAADWSRRPLPEDWLRYAALDVEVLVELRDALYE
QLVESGKLEWALEEFAAILSAPASPPKSDPWRRTSGIHRVRSLRGLAIVRELWTLRDEIA
READLAPGRVLPDSAIVQAALEQPRTTKALTEITAFTGRSARRHLREWLDAVNRGRTMPE
SALPQPAPPGNGPPPTNRWADRDPAAAKRLAAARTVLAGLSEEHRVPVENLLPPDAVRKL
TWSPPAEITTETVADRLRELGARRWQVALTAGPLAAELARLAG
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgacccagccccacgtcgaaccgctgctggaaccgcgcgacggcatcccgccggtcatc
gagacctggccggagctgtccgcggcggtggacgcgttcgcccggggaaccggcccggtc
gcgatggacgccgagcgggcgtccggctaccggtacagcggccgcgcctacctggtccag
ctccgccgggagggcgcgggcacggcgctgatcgacccggtcgcctgccccgacctcggt
gagctcgaccgggtcctcgccgatgcggagatcgtgctccacgcggcgacgcaggacctg
ccgtgcctcgccgagctcggcttccggccgcgccggctgttcgacaccgagctcgccgcc
cggctgctggggtacgagcgggtcgggctcgccaccatggtggaggtcgtcctcggcctg
cggctggagaagggccactccgccgcggactggtcgcggcgcccgctccccgaggactgg
ctgcgctacgcggcgctcgacgtcgaggtgctggtcgagctgcgcgacgccctgtacgag
cagctcgtcgaaagcgggaagctggagtgggcgctggaggagttcgccgcgatcctctcc
gccccggccagcccgccgaagagcgacccgtggcggcgcacctccggcatccaccgggtg
cggagcctgcgcgggctcgcgatcgtgcgggagctgtggacgctgcgcgacgagatcgcc
cgggaggccgacctcgcccccggccgggtgctgccggactccgccatcgtgcaggccgcc
ctggagcagccccgcaccaccaaggcgctcaccgagatcacggcgttcaccggccgcagc
gcccggcgccacctccgcgaatggctcgacgcggtgaaccggggccggaccatgccggag
agcgcgctcccccagcccgccccgccgggcaacggcccgccgccgacgaaccgctgggcc
gaccgcgatcccgcggccgccaagcgcctcgcggccgcccggaccgtgctggccggcctc
tccgaggagcaccgggtcccggtggagaacctgctgccgcccgacgcggtgcggaagctc
acctggtccccgcccgcggagatcaccacggagacggtcgccgaccggctgcgggagctg
ggagcgcggcggtggcaggtcgcgctgaccgccgggccgctcgccgccgagctcgcccgc
ctggccggctag
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