Tistrella bauzanensis: P7L64_24570
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Entry
P7L64_24570 CDS
T11986
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tbj Tistrella bauzanensis
Pathway
tbj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P7L64_24570 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbj03021
]
P7L64_24570 (rho)
03019 Messenger RNA biogenesis [BR:
tbj03019
]
P7L64_24570 (rho)
Transcription machinery [BR:
tbj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
P7L64_24570 (rho)
Messenger RNA biogenesis [BR:
tbj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P7L64_24570 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
AAA_22
OB_RNB
AAA
Spore_III_AA
S1CSD-TOTE-2
Fungal_virus_P2_C
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
XEY00763
LinkDB
All DBs
Position
complement(4589920..4591182)
Genome browser
AA seq
420 aa
AA seq
DB search
MNLQELKTKTPAELLQFAETLGVENAGTLRKQDLLFAILKQSAEQNVAIHGGGVLEVLQD
GFGFLRAPESNYLAGPDDIYVSPQQIRRFGLRTGDTVDGQIRAPKEGERYFALLKVTTIN
FEEPDHARHKINFDDLTPLYPDERLNLELSDPTKKTATTATRVIDLVSPFGKGQRALIVA
PPRTGKTVLLQNIAHAIATNHPECYLIVLLIDERPEEVTDMIRSVKGEVISSTFDEPASR
HVQVAEMVLDKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPK
RFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELILDRKLADKRTFPAI
DIGKSGTRKEELLVDRGTLSKMWVLRRVLMPMGTIDAMDFLVDKLKHTKSNADFFDSMNS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaggaactgaagacgaaaaccccggcggaactgttgcagttcgccgaaacc
ctgggcgtcgagaacgccggcacgttgcgcaagcaggatctgctgttcgcgatcctgaag
cagtcggccgaacagaacgtcgccatccatggcggtggtgtgctcgaagtacttcaggac
gggttcggcttcctgcgggccccggaaagcaattatctcgctggaccggatgacatttat
gtcagcccccagcagatccgccgcttcggcctgcgcaccggcgacacggtcgacggccag
attcgggcaccgaaagagggcgagcgctatttcgcgctgctcaaggtcaccacgatcaac
ttcgaagagccggaccatgcccggcacaagatcaatttcgacgatctgaccccgctctat
cccgatgagcggctgaacctggaactctccgacccgacgaagaagaccgccaccacggcg
acccgggttatcgatctggtgtcgcccttcggcaagggccagcgcgccctgatcgtggcg
ccgccgcgcaccggcaagaccgtgctgctgcagaacatcgcccatgcgatcgcgaccaac
catccggaatgctatctgatcgtgctgctgatcgacgagcggccggaagaggtgaccgac
atgatccggtcggtgaagggcgaggtgatcagctccaccttcgacgagccggcttcgcgc
catgttcaggtcgcggaaatggtgctcgacaaggcgaagcggctggtcgagcacaagcgt
gacgtggttatcctgctcgactcgatcacccgtctggcccgcgcctacaacaccgtggtc
ccgtcctcgggcaaggtgctgaccggcggtgtcgatgccaacgccctgcagcgcccgaag
cgcttcttcggtgcggcccgcaatatcgaagagggcggttctctgaccatcattgccacg
gcgctgatcgacaccgggtcgcgcatggacgaggtcatcttcgaagagttcaagggcacc
ggcaattcggaactgattctcgaccgcaagctcgccgacaagcgtaccttcccggcgatc
gatatcggcaagtccggtacccgcaaggaagagctgctggtcgatcgcggcaccttgtcg
aagatgtgggtgctgcgtcgcgtgctgatgccgatgggcacgatcgatgccatggacttc
ctggtcgacaagctgaagcataccaagagcaatgccgacttcttcgactcgatgaacagc
tga
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