Hujiaoplasma nucleasis: HF295_01540
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Entry
HF295_01540 CDS
T08014
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tbk
Hujiaoplasma nucleasis
Pathway
tbk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF295_01540 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbk03019
]
HF295_01540 (pnp)
03016 Transfer RNA biogenesis [BR:
tbk03016
]
HF295_01540 (pnp)
Enzymes [BR:
tbk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HF295_01540 (pnp)
Messenger RNA biogenesis [BR:
tbk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HF295_01540 (pnp)
Transfer RNA biogenesis [BR:
tbk03016
]
Prokaryotic type
tRNA degradation factors
HF295_01540 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
LXG
OB_RRP5_4th
SPATA25
Motif
Other DBs
NCBI-ProteinID:
QLY39614
UniProt:
A0A7L6N539
LinkDB
All DBs
Position
335925..338042
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AA seq
705 aa
AA seq
DB search
MKKVFKKDFYGTELVVETGKFAKQATGACMVRYGDTAVLSASVIGREPSRMDFFPLMVIY
QEKLYSAGKIPGGFLRREGRPTEHETLISRAIDRPLRPLFSEGFRYEVQVINTVMSADPN
KTPEMTALFGASLSLKLGGVPFEGPVAGVMVGYKDGEFILNPTPEELLDSEIDLIVAGTK
DAINMVEAGAKEVDEDIMLDAIMFGHDKIKELVAFQEEIIAEVGKETIEVELLLPEDSLI
KEVHDLEAGRITKAVSIKEKLERQNTIEDIEKEIQETLEAKYLAEGMDKYDVSSLLKDVR
AILEEIQVKEVRRLITEDKIRPDGRKTDEIRDLESEIDILKRAHGSSLFTRGQTQALATV
TLGALRESQIIDDISVDENKRFMLHYNFPQFSVGSTGRYGGPGRREIGHGALGERALYQV
LPDENEFPYAIRVVSEILESNGSSSQATICAGSMALMAAGVPIKAPVAGIAMGLVMDGDN
YTVLTDIQGLEDHFGDMDFKVAGTEKGICSLQMDIKISGITKAIFKESLAQAKKARMEIL
ENMNGAIKEPRKELSEFAPKVKLMQVSPDKIRDIIGAGGKNITAIIEQCNNVKIDIEQDG
RIILMHEETFFINKAMKLIEDIIREVEVGEKYLGKVTRIEKFGAFVELWPGQEGLVHISK
LDNKHIKNVEDVVKLGDTIEVKVIKVDEKGRVDLSRKDVLNDIKE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtatttaagaaagatttttatggaactgaactggttgtagaaactggtaag
tttgctaaacaagctactggagcttgtatggttcgttatggtgatactgctgtattatct
gcatctgtcatcggtagagaaccaagtcgaatggattttttcccattgatggtcatatat
caagaaaaactatattctgcaggtaaaatccctggaggttttttaagaagagagggtcga
ccaacagaacatgaaacattaatttcacgtgcgatcgatagacctctaagacctttattt
agtgaaggttttagatatgaagttcaagttattaatactgttatgtccgctgatcctaat
aagacacctgagatgactgctttatttggtgcttctttatcattaaaacttggtggtgtt
ccttttgaaggtccagttgctggagttatggttggatataaggatggagaatttatttta
aatccgacacctgaagaattattagattcagaaattgatttaattgttgctgggactaaa
gatgctatcaatatggttgaagccggtgctaaagaagttgatgaagatatcatgttggat
gctatcatgtttggtcatgataaaattaaggaattggttgctttccaagaagaaattatt
gcagaggttggaaaagaaactattgaagttgaattattattgcctgaagattctttgatt
aaagaagttcatgacttagaggctggtagaataactaaggctgtttctatcaaagaaaag
cttgaaagacaaaacacgattgaagatattgaaaaagaaattcaagaaacacttgaagct
aaatacttagctgaaggtatggataagtatgatgtttcttcacttttaaaagatgttaga
gcgattttagaagaaattcaagtcaaagaagtaagacgtttaattactgaagataagatc
agaccagatggaagaaaaactgatgaaattagagatttagaatctgaaattgatatatta
aaacgagctcacggttcatctttatttactagaggacaaactcaagctttggcaacagtt
actttaggagccttaagagaatctcaaattattgatgatatttcagttgatgaaaataaa
cgttttatgttacattataactttcctcaattttcagttggatcaactggacgttatggc
ggaccgggccgtcgagaaatcggacatggtgctttgggtgaaagagctttatatcaagta
ctgccagatgaaaatgaattcccatatgctattcgagttgtatctgaaatcttagaatca
aatggatcttcttcacaagctactatttgtgctggatctatggctttaatggccgcaggg
gttcctatcaaagctccagttgctggaatagcgatgggacttgttatggatggagataat
tatacagtattaacggatattcaaggtttagaagaccattttggtgatatggactttaaa
gttgctggaacagaaaaaggaatttgttctttacaaatggatattaaaatttctggtatt
acaaaagcaatttttaaagaatctcttgcacaagctaaaaaagcgagaatggaaattctt
gaaaacatgaatggtgctataaaagaacctagaaaagaattgtctgaatttgcacctaaa
gtcaagttaatgcaagtatcacctgataagattagagatattatcggtgcaggtggaaag
aatattacagccattattgaacaatgtaataatgtcaaaattgacatagaacaagatggt
cgtattattttaatgcatgaagaaacattctttattaataaggcaatgaagttaatagaa
gatattattcgtgaagttgaagttggtgaaaaatatctaggtaaagtcacaagaattgag
aaatttggtgcttttgttgaattatggccaggacaagaaggtctagtccatatttcaaaa
ttagataataaacatatcaaaaatgttgaagatgttgttaagttgggcgatacgattgaa
gttaaagtcatcaaagttgatgaaaaaggtcgcgttgatttatcaagaaaagatgtttta
aacgatattaaagaatga
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