Hujiaoplasma nucleasis: HF295_02190
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Entry
HF295_02190 CDS
T08014
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
tbk
Hujiaoplasma nucleasis
Brite
KEGG Orthology (KO) [BR:
tbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbk03019
]
HF295_02190
03009 Ribosome biogenesis [BR:
tbk03009
]
HF295_02190
Enzymes [BR:
tbk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HF295_02190
Messenger RNA biogenesis [BR:
tbk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HF295_02190
Ribosome biogenesis [BR:
tbk03009
]
Prokaryotic type
rRNA helicases
HF295_02190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
Microtub_bd
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QLY39730
UniProt:
A0A7L6N0E8
LinkDB
All DBs
Position
complement(487097..488389)
Genome browser
AA seq
430 aa
AA seq
DB search
MKKFNKQYLNDALAAIHFNELTDVQAKVLELDKQNQPLIIEAKTGSGKTHSFLLPILENL
DEDILECQAVIVAPTRELALQIEKFARDLIKHSDKIIKISMFTGGTDRDQSIENLSSQQP
HIVIGTPGRLHDLVFKENILKIYTAKYFIIDEADMALDQNFIEELSNLANICQRAKIMVF
SATIPERLMPFLKKYLNNPISLKVHPDEISNLNIDHYFIKSKEKPRMDILNQILNAINPY
LAIIFCNTKESAEEVYEMMSEKNYNVALFHGGLAHRKRKQLIQRVNHLDFQYLVATDILA
RGIDIVGVSHVINYELPQDTEFYIHRSGRTGRINMDGQCLSIYEFNDNQYLDDLERKGVK
THYKDIKNNSIIDVKDRNARSERHWQENDVDRAAKLKVKKPSKVKPGYKKKYKQKVAIEK
KKLNRIMKKK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttaacaaacaatacttgaatgacgctttggctgccattcattttaatgaa
ttgacagatgttcaagcaaaagtgcttgaattggataaacagaatcaacccttaattata
gaagcgaaaactgggtctggaaaaacccattcttttttattaccgattttagaaaaccta
gatgaagatattcttgaatgtcaagcggttattgtcgcacctactagagaactagccttg
caaatagaaaaatttgctagagacttaatcaaacattcagataaaataattaaaatatct
atgtttacaggagggactgacagggaccaaagcattgaaaatttatcatcccaacaacct
cacatcgtgattggtacaccaggaagattacatgacttagtttttaaagaaaacatttta
aaaatatatacagccaaatattttattattgatgaagcagatatggccttagaccaaaat
ttcattgaagaattatcgaatttagccaatatctgtcaaagagcgaaaatcatggtcttt
tcagccaccatcccagaaagactcatgccatttttaaaaaaatacttaaataatccaatt
tctttaaaagttcatcctgatgaaatatccaacttgaatattgatcattattttattaaa
tcaaaagaaaaaccaagaatggatatcttaaatcaaatattaaatgctattaatccatat
ttagctattattttttgtaatactaaagaatcagctgaagaagtctatgaaatgatgtct
gaaaagaattataatgtggccttatttcatggtggtctagcccatcggaaaagaaaacaa
ttaattcaaagagtcaatcatttagattttcagtatcttgtggccacggatatactagct
agaggaattgatattgtaggtgtatctcatgtcattaattatgaattaccacaagacact
gaattttatattcatcgaagtggtaggactggccgcattaatatggatggtcaatgtcta
tctatttatgaatttaatgacaaccaatatctcgatgaccttgaaagaaaaggggttaaa
acgcattataaagatataaaaaataactcaattattgatgttaaggatagaaatgctcga
agtgaacgtcattggcaagaaaatgatgttgatagggcagctaaattaaaagtaaaaaaa
ccgtctaaagtaaaaccaggttataaaaagaaatataaacaaaaagtcgctattgaaaag
aaaaaattaaataggataatgaagaaaaaatga
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