Henningerozyma blattae: TBLA_0B08880
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Entry
TBLA_0B08880 CDS
T02489
Symbol
TBLA0B08880
Name
(RefSeq) hypothetical protein
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
tbl
Henningerozyma blattae
Pathway
tbl03013
Nucleocytoplasmic transport
tbl03015
mRNA surveillance pathway
tbl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tbl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TBLA_0B08880 (TBLA0B08880)
09122 Translation
03013 Nucleocytoplasmic transport
TBLA_0B08880 (TBLA0B08880)
03015 mRNA surveillance pathway
TBLA_0B08880 (TBLA0B08880)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbl03019
]
TBLA_0B08880 (TBLA0B08880)
03041 Spliceosome [BR:
tbl03041
]
TBLA_0B08880 (TBLA0B08880)
Enzymes [BR:
tbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TBLA_0B08880 (TBLA0B08880)
Messenger RNA biogenesis [BR:
tbl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
TBLA_0B08880 (TBLA0B08880)
Spliceosome [BR:
tbl03041
]
Complex C
Other components
EJC/TREX
TBLA_0B08880 (TBLA0B08880)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
TBLA_0B08880 (TBLA0B08880)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ANAPC_CDC26
Motif
Other DBs
NCBI-GeneID:
14494052
NCBI-ProteinID:
XP_004179223
UniProt:
I2H002
LinkDB
All DBs
Position
2:complement(2108994..2110322)
Genome browser
AA seq
442 aa
AA seq
DB search
MSNEGEEDLLEYSDNEQEIQIDANANATSSEAVTTSADGEAKDADAEKKGSYVGIHSTGF
KDFLLKPELSRAIIDCGFEHPSEVQQSTIPQSIHGTDVLCQAKSGLGKTAVFVLSSLQQL
DPVPGEASVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPINKDAELLKNKDTA
PHIVVATPGRLKALVKDKLIDLSHVKNFIIDECDKVLEELDMRRDVQDIFRATPRDKQVM
MFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQFFIKLSESDKNRKLAQLLDDL
EFNQVIIFVKSTKRANELTKLLNASNFPAITVHGSMKQEERIARYKAFKDFEKRICVSTD
VFGRGIDIERINLAINYDLTNEADQYLHRVGRAGRFGTKGLAISFVSSTEDEEVLAKIQE
RFDVKIAEFPAEGIESSSYLNN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgaaggtgaagaagatttattggaatactctgataacgaacaagaaattcaa
attgatgccaatgccaatgccacttcctctgaagctgttactacttcagctgatggtgaa
gctaaggacgctgacgctgaaaagaagggttcatacgttggtatccattctactggtttc
aaagatttcttattaaaacctgaattatctagagcaattattgattgtggtttcgaacat
ccttctgaagtccaacaatccactattcctcaatctattcacggtaccgatgtcttatgt
caagccaaatctggtttaggtaagactgcggtcttcgttttatcaagtttacaacaatta
gacccagttccaggtgaagcttctgttgttgtcatttgtaacgccagagaattagcttat
caaatccgtaatgaatacttgagattctccaaatatatgcctgacgtcaagactgctgtc
ttctatggtggtactccaattaacaaggacgccgaattattgaaaaacaaagatacagct
ccacatatcgttgttgccactccaggtcgtttaaaggctttggtcaaggacaagctaatt
gatttatcccacgttaagaacttcatcattgatgaatgtgataaagttttggaagaatta
gatatgagaagagatgttcaagatattttcagagctactccaagagacaaacaagtcatg
atgttctcagctactttatctcaagaaattagaccaatctgtagacgtttcttacaaaat
cctttagaaattttcgttgatgatgaagctaaattaactttacatggtctacaacaattt
ttcattaaattatctgaatctgataagaaccgtaaattagctcaattattagatgatcta
gaattcaaccaagttatcatctttgtaaaatctaccaagagagctaatgaactaaccaaa
ttactaaatgcttcaaatttcccagctatcactgttcatggtagcatgaaacaagaagaa
cgtattgcccgttataaagccttcaaagattttgaaaaacgtatttgtgtttctactgat
gtttttggtagaggtattgatattgaacgtatcaacttggctatcaattatgatttaaca
aacgaagctgatcaatatttacatagagtcggtagagctggtagattcggtacaaagggg
ttggctatctcttttgtttcttctactgaagatgaagaagttttagccaaaatccaagaa
cgtttcgatgttaaaattgccgaattcccagccgaaggtatcgaatcctctagctatttg
aacaattaa
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