Tenericutes bacterium MO-XQ: BK010_02600
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Entry
BK010_02600 CDS
T05457
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tbm
Tenericutes bacterium MO-XQ
Pathway
tbm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BK010_02600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbm03400
]
BK010_02600
Enzymes [BR:
tbm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BK010_02600
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BK010_02600
DNA repair and recombination proteins [BR:
tbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BK010_02600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
Zn_Ribbon_TF
DUF2835
Stealth_CR2
DUF5491
Zn_ribbon_6
DUF7573
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AUD62527
UniProt:
A0A2K9AFV8
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All DBs
Position
500006..500815
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AA seq
269 aa
AA seq
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MPELPEVETVRRTLLLKLKDETIKDIDIRYPNIIKTDLKSFTSVLINQTIHDIDRMGKYL
IFILDQHVIVMHLRMEGKFYIKSHEPYDKHEHIIFKFKSGMELRYHDVRKFGTMHVLSKD
HYLDEYPLSELGLEPKDLNPKDFYQRIHRSERPIKASLLDQHIISGLGNIYVDETLFLAK
VHPTRLSKNITKKEAESLVSAATSVLAKAVRLGGTTIRSYTSSLGVHGRFQNELNVHTKK
GEPCPICGTPIIKIKVAGRGSYVCPSCQT
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttccagaagtagaaactgtaaggcgtaccttactattaaaactcaaagat
gaaaccatcaaagatattgatattagatatccaaatattatcaaaacagatttaaaaagc
tttacatcagttttaatcaatcaaacgattcatgatatcgatcgtatgggtaaatattta
attttcatacttgatcagcatgtgattgtcatgcatctaagaatggaaggtaagttctat
ataaaatctcatgaaccttatgataaacatgaacacattattttcaaatttaaaagtggt
atggaacttagataccatgacgtaaggaaatttggaacgatgcatgttttgtcaaaagat
cattatttagatgagtatccactttctgagttaggtttagaacccaaagatttaaatcca
aaagatttttatcaaaggattcatcgttcagaaagaccgattaaagcaagcctacttgat
caacacatcatcagtggacttgggaatatatatgttgatgaaactttgtttttagcaaaa
gttcatcctacaagattatcaaaaaatataacaaaaaaagaagctgaaagcttagtttca
gcagcaacctctgtattagcaaaagcagttcgtcttggggggacaaccattagatcatat
acatcaagcttaggtgttcatggtcgatttcaaaatgagcttaatgttcacacaaaaaag
ggcgaaccttgcccgatttgtggcacacccatcataaaaattaaagtagcaggacgtggt
tcttatgtctgcccatcatgtcaaacctaa
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