Tenericutes bacterium MO-XQ: BK010_03230
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Entry
BK010_03230 CDS
T05457
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tbm
Tenericutes bacterium MO-XQ
Pathway
tbm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BK010_03230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbm03019
]
BK010_03230
03009 Ribosome biogenesis [BR:
tbm03009
]
BK010_03230
Enzymes [BR:
tbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BK010_03230
Messenger RNA biogenesis [BR:
tbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BK010_03230
Ribosome biogenesis [BR:
tbm03009
]
Prokaryotic type
rRNA helicases
BK010_03230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
RMI1_N_C
UBA_3
TRAUB
RecX_HTH1
Motif
Other DBs
NCBI-ProteinID:
AUD62647
UniProt:
A0A2K9AG72
LinkDB
All DBs
Position
625248..626933
Genome browser
AA seq
561 aa
AA seq
DB search
MNKLFNELPILNETKEAIKALGLVETTDIQHHTINHLLEKKDLIGQAQTGTGKTFAFAIP
MLEHINPNSNVIQGLVICPTRELTLQVYKEFIKLVKFNKNIRVTSIYGGESYQKQFKALQ
NHPHIVVATPGRAIDHLERKTMDLSHLEMLVMDEADEMLKMGFQEDLEKLLKDTPQERQT
ALFSATMPDFIKKVAQKYQRNPEIVVIKTKALTVDKIDQYYYMIKKTDRDQLLLRVLDFF
HPQSAIIFANTKKDVDHVAAYLQKFNYEADALHGDLKQNQRDYVMNKFRSRKLTLLVATD
VAARGLDVSHVDIVINYELPFEDEVYVHRIGRTGRAGESGTSISFVYPSMRGKLMLIEKF
IKSKMQELEIPTILEITQKQDDKLFNDIKHYIDVKEKNYTELIDRLVKQGYDVDDIISAL
IEKLSVKIKPYEDISKPRTRQESFSQKSSRGDRQGRRSDRSGRSNDRSGKSNDRSNSSRN
SGPSNLILVDMNIGKQDGLRAPHMLDYFKKNADMYPKNIGDINIYDNHTTFEINAKAVKR
LDQLDNKIFKGRQLKFKITKK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattatttaacgaattaccaattttaaatgaaacaaaagaagcgatcaaagcg
ctagggttagttgaaacgacagacattcaacatcatacaatcaatcatctattagagaaa
aaagatttaatcggacaagctcaaacaggaacagggaaaacattcgcgtttgcgattcct
atgcttgaacacatcaatccgaattcaaatgtgattcaaggattagtgatctgtccaaca
agagagttaactttacaagtttataaagaatttataaagcttgtcaaatttaataaaaac
atcagagtgacatctatttatggtggagagtcttatcaaaaacaatttaaggcactacaa
aaccatccacatattgttgtagcaactccaggtagagcaattgatcacttagaaagaaaa
accatggacttatctcatcttgagatgcttgtcatggatgaagctgatgaaatgcttaaa
atgggatttcaagaagatcttgaaaaactattaaaagacacaccacaagaaagacaaact
gctttattttcagcaactatgcctgattttattaaaaaagttgcgcaaaagtatcaaaga
aatcctgaaattgttgtgattaaaacaaaggcattaactgtagataaaattgatcaatac
tactacatgattaaaaaaactgatcgtgatcaattattattaagagttttagactttttc
catccacagtcagcaattatctttgcgaatactaaaaaggatgtagaccatgttgcagca
tacttacaaaaattcaattacgaagctgatgcacttcatggagatttaaaacaaaatcaa
agagattatgtgatgaataagtttagatcacgtaaacttacattattggttgcaaccgat
gtcgcagcacgtggacttgatgtctcacatgttgatatcgtcatcaactatgaattacca
tttgaagatgaagtttatgtacaccgtattggtcgtacaggtagagccggtgaatctgga
acttcaatctcatttgtttacccttcaatgagaggtaagctcatgcttattgaaaaattc
attaagagtaaaatgcaagagttagagattccaacgatcttagaaatcactcaaaagcaa
gatgataaattatttaatgacattaaacattacattgatgttaaagaaaaaaattataca
gagcttattgaccgattggttaaacaaggatatgatgttgatgatatcatctcagcactt
attgaaaaattatctgttaagattaaaccttatgaagatatttcaaaaccaagaactaga
caagagtcatttagtcaaaaatcttcaagaggagatagacaaggcagaagaagtgatcgc
tctggaagaagtaatgatcgttctggaaaaagcaatgatcgttcaaatagttcaagaaat
agtggaccatcaaatctcattttagtcgatatgaatatcggtaagcaagatggattaaga
gcaccacatatgcttgattattttaagaaaaatgcagacatgtatccgaaaaatattgga
gacatcaatatctatgataatcatacaacttttgaaatcaacgcaaaagctgtaaaaagg
cttgaccaactcgacaacaaaatatttaaaggacgtcaattaaagtttaagataactaag
aaataa
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