Tenericutes bacterium MO-XQ: BK010_09005
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Entry
BK010_09005 CDS
T05457
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tbm
Tenericutes bacterium MO-XQ
Pathway
tbm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BK010_09005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbm03019
]
BK010_09005
Enzymes [BR:
tbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BK010_09005
Messenger RNA biogenesis [BR:
tbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BK010_09005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
DUF7263
Cas3-like_C_2
P-loop_SecA
DUF447_C
Motif
Other DBs
NCBI-ProteinID:
AUD63721
UniProt:
A0A2K8ZTY8
LinkDB
All DBs
Position
complement(1779246..1780580)
Genome browser
AA seq
444 aa
AA seq
DB search
MSFNKLGIIPEILKAVEQEGYDIPSPIQEQAIPVLLNQKDVLASAQTGTGKTAAFSIPII
QGLYQDKLPYDKKYIRALVLAPTRELAEQIKDSFRGYSKNMGLKTEVIYGGVSQRGQEIA
LRKGVDILVATPGRLLDLINQGLVKLDFVKYLVLDEADHMLDMGFIKDVRKIVSYVKNMH
QTMMFSATLPKEILAFANELLINPTRIEITPPEAMLDIIEHNLYYVTKKDKTNLLIDLLV
NPKMASVLVFTRTKHGANKLVKELLSYGVKADAIHGNKSQNMRQKALNNFKSKKLRVLVA
TDIAARGIDVDDLSHVINYDLPESPETYVHRIGRTGRAKKTGIAISFCSQDEAYLLRAIE
KTNQIKIPVIQDQPFHTTIRVNETKNELKIIKAQKGNESKRGSKNTRKKAYSTDKNKKEA
PYQKTKSKKKYYDKYSKSKSSRNY
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaataaattaggaattatcccagaaatactaaaagcagttgaacaagaaggt
tatgatataccttcaccgattcaagaacaggcaattcctgtgcttttaaaccaaaaagat
gtgctcgcaagtgcacaaacaggaaccggtaaaacagcggctttttcaataccaatcata
caaggactatatcaagacaaattaccatatgataaaaaatatattagagccttagtttta
gcaccaacaagagaattggctgaacaaatcaaagatagttttagagggtactctaaaaat
atgggtttgaaaacagaagtgatttatggtggagtatcacaaagaggtcaagagattgct
ttaagaaaaggtgtagatatattagttgctacaccaggtagattattagatttaattaat
caaggattagtcaaattagattttgttaaatatttggttttagatgaagcagatcatatg
ttggacatgggatttatcaaggatgttagaaaaatagtatcctatgttaaaaacatgcat
caaacgatgatgttttcagcaactttaccaaaagaaatattagcttttgctaatgagctt
ttaataaatcctacaagaattgaaatcacaccaccggaagcgatgctcgatatcattgag
cataacttatattatgttactaaaaaagataaaacaaatttacttatagatttgctagtt
aaccctaaaatggcctctgttttagttttcacaagaactaaacatggggcaaacaaatta
gttaaagaattattatcatatggcgttaaggcagacgctattcatggcaataaatcacaa
aacatgagacaaaaagctttgaacaattttaaatccaaaaagttaagagttttggttgct
acagatattgcagcacgtggaattgatgtggatgacttatcgcatgttatcaactatgat
ctaccagaatcaccagaaacctatgtacatagaatcggtagaacaggtagagctaaaaaa
accggaattgccatttccttttgttctcaagatgaagcatatttattaagagcaatagaa
aaaacaaatcaaattaaaattcctgtaatccaagatcagccttttcatacaaccattaga
gtgaatgaaacaaaaaatgaattaaaaatcattaaagctcaaaaagggaatgaatcaaaa
cgtggatcaaaaaacacaagaaaaaaagcttactcaacagataaaaataaaaaagaagca
ccttatcaaaaaacgaaatcaaaaaagaaatattatgataaatattcaaaatctaagtca
tcaagaaattattaa
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