Thiolapillus brandeum: TBH_C0246
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Entry
TBH_C0246 CDS
T03600
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
tbn
Thiolapillus brandeum
Pathway
tbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TBH_C0246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbn03019
]
TBH_C0246
Enzymes [BR:
tbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TBH_C0246
Messenger RNA biogenesis [BR:
tbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TBH_C0246
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
CMS1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAO43192
UniProt:
A0A7U6JGT1
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All DBs
Position
complement(276862..278163)
Genome browser
AA seq
433 aa
AA seq
DB search
MSDNKHLTDTRFDSFGLSESVLAGVKDAGFEYCTPIQAATLPPALKGHDVAGQAQTGTGK
TAAFLLAALHHMEQHPPSQKRRPNQPRVLIIAPTRELAIQIEKDARVLAGHTGHKLEVVY
GGTGYESQRKAVGEGVDILVGTPGRLIDYFKQKIYDLQEIQVVVLDEADRMFDLGFIKDI
RFLLRRCPPPEKRLGMLFSATLSFRVKELAYEHMNNPRAIEIEPDKVTADRIEEQGYMTA
NDEKIPLLIGLLNQWKGARTIVFVNTKRAADKVWGFLQGNGLQAAVLSGDVPQKKRMSLL
KKFTNGELDVLVATDVAARGLHIPDVTHVINYDLPEDAEDYVHRIGRTGRAGAKGSAISF
VCETHAFSLPEVEAYIGHKIPMSSVPGDLLANVDPSSRVHAPRKSRNRPGQHAKGRGGHR
KPRQGRSRSQRRS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataacaaacaccttaccgatacccgcttcgacagctttggcctgtcggaatcc
gtactcgccggcgtcaaagatgccggctttgaatactgcacgccgatccaggcggctact
ttgccgcccgccctgaaaggccatgatgtggccgggcaggcgcagacaggaaccggcaag
acagctgccttccttctcgctgccctgcatcatatggagcagcatccgccttcacagaaa
cgccgtcccaaccagccacgggtgttgatcattgcccctacccgtgaactggccatccaa
atcgaaaaggatgcgcgggtactggccgggcataccggccacaaactggaggttgtctac
ggcggtaccggatacgaatcccaacgcaaggctgtcggtgaaggcgtggacattctggta
ggcaccccgggacgtctcatcgactatttcaaacaaaaaatctatgacctgcaggagatc
caggtagtggtgctggacgaggcggatcgcatgttcgacctgggcttcatcaaggatatc
cggttcctgctgcgccgctgcccgccaccggaaaaacgcctgggcatgctgttctccgcc
actctgtccttccgcgtgaaggaactggcctatgagcacatgaacaatcccagggccatc
gagatcgaacccgacaaagtcaccgctgatcgtatcgaggaacagggatacatgaccgcc
aatgatgagaagattcctctgctcatcgggctgttgaaccagtggaagggcgcaagaacc
atcgtcttcgtcaataccaagcgggccgccgacaaagtatggggcttcctccagggtaat
ggcttgcaggctgccgtactctctggcgacgtgcctcagaagaagcgcatgagtctgctg
aaaaaattcaccaatggtgaactggatgtattggtagccactgatgtggcggcccggggt
ctgcatataccggacgtcacccatgttatcaactatgatttacccgaggatgcagaagat
tatgtgcatcgcattggacgtaccgggcgagccggggccaagggcagcgccatcagcttc
gtctgcgagacccatgccttctccctgccggaagtggaagcctacatcgggcacaaaatc
cccatgagctccgttcccggagacctgctggccaatgtagacccctccagccgggtgcac
gccccgcgcaaatcaagaaaccggccagggcaacatgccaagggaagaggcgggcacaga
aaaccccgccagggtcgctcacgcagccaaagacgaagctga
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