Thiolapillus brandeum: TBH_C0248
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Entry
TBH_C0248 CDS
T03600
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tbn
Thiolapillus brandeum
Pathway
tbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TBH_C0248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tbn03021
]
TBH_C0248
03019 Messenger RNA biogenesis [BR:
tbn03019
]
TBH_C0248
Transcription machinery [BR:
tbn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
TBH_C0248
Messenger RNA biogenesis [BR:
tbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TBH_C0248
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
Fungal_virus_P2_C
ATPase_2
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
BAO43194
UniProt:
A0A7U6JFT8
LinkDB
All DBs
Position
278879..280141
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AA seq
420 aa
AA seq
DB search
MNLNDLKKMPVPELSAMAQSMKIQGTGRSRKQDLIFAILKAHAKKGEDIHGSGVLEILQD
GFGFLRSADSSFLAGPDDIYVSPSQIRRFALRTGDTISGTIRPPKDNERYFALLKIDEIN
YDKPEVAKNKILFENFTPLFPNEPLHLEMGNGSTEDITARTIELVAPVGKGQRGLIVSPP
KAGKTMMMQNIAQSIVRNHPEVYLIILLIDERPEEVTEMARSVATAEVISSTFDEPAARH
VQVAEMVIAKAKRLVEHNRDVVILLDSITRLARAYNTVIPSSGKVLTGGVDANALQKPKR
FFGAARNVEEGGSLTILASALVETGSRMDDVIYEEFKGTGNMEVHLDRRIAEKRVFPAIN
INRSGTRREELLIPQAELQKIWILRKILHPMDELAAMEFLYDKLKQTKTNEEFFNSMKKK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaacgatctaaagaaaatgcccgtcccggaactgtcagccatggctcagtcc
atgaagatccagggcacaggacgctcccgcaagcaggatctcatctttgccatactcaaa
gcccatgccaagaaaggcgaggacatacatggcagtggagtgctggaaatcctccaggat
ggttttggcttcctgcgctctgctgactcgtcttttctcgccggtcccgatgacatctat
gtgtcgcccagccagatccgccggtttgccctgcgcaccggtgatacgatttccggaact
atccgtcctcccaaggacaatgagcgctatttcgccctactcaagatcgatgagatcaac
tatgacaaacctgaagtcgccaagaacaagatcctgttcgaaaacttcacgcccctgttt
cccaatgagcctctgcacctggagatgggtaatggcagcacggaagacatcaccgcgcgc
actattgaactggtagcgcccgtgggaaaggggcagcgtggccttatcgtctccccgccc
aaggcaggcaagaccatgatgatgcagaacattgcccagtccatcgtcaggaaccatccg
gaggtctatctgatcatcctgctcatcgatgagcgtcccgaggaagtgacggaaatggcc
cgttcggtagctacggcggaagtgatctcctccactttcgatgaacctgcggcacgccat
gtgcaggtggcggaaatggtgatcgccaaggccaaacgcctggtggagcacaatcgtgac
gtggtgattcttctcgattccatcacccgtctggcgcgggcctataacactgtcattcct
tcttccggaaaggtgctcacaggcggtgtggatgctaatgccctgcagaaacccaaacgc
ttttttggtgcggcacgcaacgtggaagaggggggctccctgaccatactggcctcggcc
ctggtggaaaccggctcgcgtatggatgacgtgatctatgaggaattcaaaggtacgggc
aatatggaagtgcacctggaccggcgcatcgctgaaaagcgggttttcccggctatcaac
atcaatcgctccggcacccgtcgggaggaattgcttattccccaggcggaactgcagaag
atctggatattgcgcaagatcctgcaccccatggatgaattggccgccatggaatttctg
tatgacaagctcaagcagaccaagaccaacgaagagttcttcaactccatgaagaagaag
tag
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