Thiolapillus brandeum: TBH_C1058
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Entry
TBH_C1058 CDS
T03600
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tbn
Thiolapillus brandeum
Pathway
tbn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TBH_C1058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbn03400
]
TBH_C1058
Enzymes [BR:
tbn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
TBH_C1058
DNA repair and recombination proteins [BR:
tbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TBH_C1058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BAO43987
UniProt:
A0A7U6JHN5
LinkDB
All DBs
Position
1144835..1145650
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AA seq
271 aa
AA seq
DB search
MRIVSFNVNGVRARPHQLKALVDQYQPDIIGLQEIKVQDSEFPREMIEELGYQVDFYGQK
GHYGVALMSREPAVEVIRGLPGDDDDSQRRLITGIYRTPGGKEITVMNGYFPQGESREHP
VKFPAKQKFYADLTEWLKQDFSPDQHLAIIGDMNIAPTDKDIGIGPDNMKRWLRTGKCSF
LPEEREWLQTLMDWGLYDSWREKYPEEDNLFSWFDYRSKGFDRDPRRGLRIDLLLASHPL
FGKLADAGIAYDIRSMEKPSDHCPVWMDADL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattgtttcattcaatgtcaacggcgtccgcgcccgtcctcatcagctcaaggcc
ctggttgaccagtaccagccggatatcatcgggctgcaggaaatcaaggtgcaggacagc
gagtttccccgggaaatgatcgaggaactcggctatcaagtggacttttacggacagaaa
ggtcattacggtgtggcgttgatgtcccgcgaacccgcagttgaagtgattcgtggattg
ccgggagacgatgatgacagccagcggcgcctgattaccggtatttacaggacgccggga
ggtaaagagatcaccgtgatgaacgggtattttccccagggagaaagccgtgaacatccg
gtcaaattccccgcaaagcaaaaattttatgcggatctgacggaatggttgaagcaggat
ttttcgccggatcagcatctggcgatcatcggtgacatgaacattgcgcctaccgacaag
gatattggcattggtccggacaacatgaagcgttggctgcgcacgggaaaatgctccttt
ctgccggaagaaagagagtggttgcaaaccctcatggactggggcctgtatgacagctgg
cgggagaaataccctgaagaagacaacctgttcagctggttcgattaccgcagtaaaggt
tttgatcgtgatcccaggcgtggcctgcgtatcgatctactgcttgccagccatcccttg
tttggcaaactggcggatgccggtattgcctatgatatccggagcatggaaaagccttct
gatcattgtccggtatggatggatgccgacctgtaa
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