Thiolapillus brandeum: TBH_C1166
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Entry
TBH_C1166 CDS
T03600
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tbn
Thiolapillus brandeum
Pathway
tbn03030
DNA replication
tbn03430
Mismatch repair
tbn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TBH_C1166
03430 Mismatch repair
TBH_C1166
03440 Homologous recombination
TBH_C1166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbn03032
]
TBH_C1166
03400 DNA repair and recombination proteins [BR:
tbn03400
]
TBH_C1166
Enzymes [BR:
tbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TBH_C1166
DNA replication proteins [BR:
tbn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TBH_C1166
DNA repair and recombination proteins [BR:
tbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TBH_C1166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
RecG_wedge
HROB
DUF2621
Motif
Other DBs
NCBI-ProteinID:
BAO44093
UniProt:
A0A7U6JHV0
LinkDB
All DBs
Position
1262910..1266446
Genome browser
AA seq
1178 aa
AA seq
DB search
MEPRFVHLHLHTEYSMVDSVVRIKPLVESLAEQGMPAVAVTDQFNLFSLVKFYRATTGAG
IKPIFGVDLHLRNPENLNHPDRLVLLARNDTGYRNLRELVSRGYQQGQHLGKPMLDRDWL
TLQSCEGLIALSGARDGDVGRALLAGHQQQAEELLDYWLERFGDAYYLQLVRTGRPDEED
CLHLSVELAARRQVPVVATNEVCFLKEEDFQAHEVRVCINQGRTLDDPRRPRDYSPQQYL
RSAEEMAELFRDIPEALENSVEIARRCNVTMTFGENFLPDFPVPDGLSMDEFFRQLAWEG
LEKRLDRILDRNAGDFEEQRKPYDERLKTELDVIIEMGFPGYFLIVADFIQWAKDNDIPV
GPGRGSGAGSLVAYALKITDLDPLALELLFERFLNPERVSMPDFDIDFCMDKRDDVIEYV
AQKYGREAVSQIITYGSMAAKAVVRDVGRVLGHPYGFTDRVAKMVPFDLGITLSKALEES
EDLKQAYENDEEVTQLIDMALQLEGLTRNAGKHAGGVVIAPGKLTDFSALYCDADGGNLV
TQFDKNDVEAVGLVKFDFLGLRTLTIIDWALKSVNRQRREQGLEPVDIDAIPMDDPESFA
LLKSAATTAVFQLESHGMKELISKLQPDSFDEITALVALYRPGPLGTGMVDDFIACKHGK
KQAEYPHPKLEPILKPTYGVILYQEQVMQIAQELAGYSLGGADLLRRAMGKKKPEEMEKQ
GEIFRQGAVERGVDEALATRIFDLMAHFAGYGFNKSHSAAYALVSYQTLWLKAHYPAPFM
AAVLSADMDNTDKVVHLIEECREMQLEVLPPQVNRSEYMFNADGDRTVVYGLGAIKGVGE
SAIDGIIAAREEGGAFKDLFDFCRRIDLRKCNRRVLESLIRAGALDEMGSNRATLMVQLP
LALKMAEQHHALEAAGQTDLFGMSEPEAPPAMGIIPDDQEDWSDEQRLRGEKETLGLFLT
GHPIDFYEQELKQIASRIGSLSLDENQKGYGRGKEVTVAGLVMAVNKRNTQRGTMASVLL
DDKSGRIELTLFNEAFEACRELLVVDKVLVVQGKLVHDEYRGGLGLRANEVSSFEDYRES
RLAALDLVLDEQFIRSRKWTAVDLRNWLQELLADFRGGRVPVAIRYQRADASALIRLGDE
WRVKPGDELLHRLYRVLGEEGVVLHFGNFVQEPATVGA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggaaccccgcttcgtacacctgcacctgcataccgaatactccatggtggacagcgtg
gtgcgcatcaagcctctggtggagagcctggcggagcagggcatgcctgcggtggcagtc
accgatcagttcaacctgttttccctggtgaagttctatcgtgccaccacgggggcaggt
atcaagcccatttttggcgtggaccttcatctgcgcaaccccgagaacctcaatcatccg
gatcgtctggtgctgctggcgcgcaacgatacgggttaccgtaatctgcgcgaactcgta
tcccggggctaccagcagggccagcatctgggaaaacccatgctggaccgggactggctt
accctgcaaagctgtgaaggcctcattgccctttccggcgccagggatggcgacgtgggc
agggccttgctggcgggccatcagcaacaggccgaagaactcctggattactggctggaa
cgctttggcgatgcctattacctgcaactggtgcgtaccggacgtcctgatgaggaagac
tgcctgcatctgagcgtggaactggctgcgcgccgccaggtgcctgtggtggccaccaac
gaagtctgttttctcaaagaggaggattttcaggctcacgaggtcagggtctgcatcaac
caggggcgcaccctggatgatccgcgtcgccccagggactattccccccagcaatacctg
cgcagtgccgaggaaatggcagagctcttcagggacattcccgaagcccttgaaaacagc
gtggagatcgcccggcgttgcaatgtgaccatgacttttggcgagaatttcctgccggac
tttccggtgccggatggcctgagcatggacgagttcttccggcagttggcttgggaggga
ctggaaaaacgcctggatcgcattctggaccggaatgccggggatttcgaggaacagcgc
aaaccctacgatgagcgcctgaaaaccgaactggatgtcatcatcgagatgggttttccc
ggttactttcttatcgttgcggatttcatccagtgggccaaggacaatgatattcccgtg
ggaccggggcgggggtccggcgcgggttccctggtggcctatgccctgaagatcacggat
ctcgaccccctggccctggaattgctgttcgagcgttttctcaacccggagcgggtttcc
atgccggatttcgatatcgatttctgcatggacaagcgcgacgatgtcatcgagtacgtg
gcgcaaaagtatggccgggaggcggtttcccagatcatcacctacggctccatggcggcc
aaggccgtggttcgggatgtgggccgggtgctggggcatccctatggctttaccgaccgg
gtggccaagatggtgcctttcgatctgggcatcaccctgagcaaggccctggaggaaagc
gaggatctgaagcaggcctatgagaatgatgaagaagtcacccaactcatcgacatggcc
ctgcaactggagggcctgacccgcaatgccggcaagcatgcgggcggggtggttattgct
ccgggtaaactcaccgacttttccgcgctgtactgtgatgccgatggtggcaacctggtc
acccagttcgacaagaacgacgtggaagccgtgggcctggtaaagttcgattttctgggc
cttcgcaccctgaccatcatcgactgggccctgaagagcgtgaaccgtcagcgccgggag
cagggattggagcccgtggacatcgacgccattcccatggatgatcccgagtcctttgcg
ctactcaagtccgccgccaccacggcggtgttccagcttgaatcccatggcatgaaggag
ctgatcagcaagttgcagccggacagtttcgacgagatcaccgctctggtggccctctac
cgtcccggtcccctgggcacgggcatggtggacgatttcatcgcctgcaaacatggcaag
aaacaggccgagtatccccatcccaaactggaacccattctcaagcccacctatggcgtg
atcctgtaccaggagcaggtcatgcagattgcccaggagctggcgggttattccctgggg
ggcgcggatctgctgcgccgggccatgggcaagaaaaagcccgaggagatggagaaacag
ggtgagatcttccgccagggggccgtagagcggggcgtggatgaagccctggccacacgc
atcttcgatctcatggcccattttgcgggttatggtttcaacaagtctcactcggcggcc
tatgccctggtgtcctaccagaccctgtggctcaaggcccactatcccgcacctttcatg
gctgcggtgctgtctgcggacatggacaatacggacaaggtggtgcatctcatcgaggaa
tgccgggagatgcagctggaagtgctgccaccccaggtgaatcgttccgagtatatgttc
aatgccgacggagaccgaacggtcgtgtatggactgggcgccatcaagggtgtgggagaa
tccgccatcgacggcatcattgccgcccgcgaggaaggaggtgccttcaaggatctgttc
gacttctgccgccgcatcgatctgcgcaaatgcaaccgccgggtgctggaatccctgatt
cgcgccggagccctggatgaaatgggcagcaaccgtgccaccctcatggtgcaactgccc
ctggccctgaaaatggcggaacagcatcatgccctggaagccgcaggtcagacagacctg
ttcggtatgagtgaacccgaagccccgccggccatgggtatcatcccggatgatcaggag
gactggagtgacgaacaacgcctgcggggagagaaggaaaccctgggcttgttccttacc
ggccatcccatcgatttctatgaacaggaactgaagcagatcgccagccgtattggcagc
ctgtccctggacgagaaccagaagggctatggccggggcaaggaagtgacggtggccggg
ttggtgatggcggtgaacaagcgcaacacccagcgcggcaccatggccagcgtgttactg
gatgacaagagcgggcgtattgaactgaccctgttcaacgaagccttcgaagcctgccgg
gagctgctggtggtggacaaggtgctggtggtgcagggcaagctggtgcatgacgaatat
cgtgggggtctgggcctgcgcgccaatgaggtaagcagcttcgaggactaccgggagagc
cgcctggcggccctggatctggttctggatgagcagtttatccgcagccggaaatggacc
gctgtggatttgcgcaactggctgcaggagttgctggcggatttccggggtgggagggtg
ccggtagccatccgctatcagcgtgccgatgccagtgccctgatccgcctgggtgatgag
tggcgggtaaaacccggggatgaactgctgcaccgcctgtaccgggttcttggggaagaa
ggcgtagtgctgcattttgggaatttcgtgcaggaacccgcgaccgtcggcgcataa
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