Thiolapillus brandeum: TBH_C1182
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Entry
TBH_C1182 CDS
T03600
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tbn
Thiolapillus brandeum
Brite
KEGG Orthology (KO) [BR:
tbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tbn03016
]
TBH_C1182
Enzymes [BR:
tbn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
TBH_C1182
Transfer RNA biogenesis [BR:
tbn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TBH_C1182
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
WHD_RNase_II
Myosin_N
Motif
Other DBs
NCBI-ProteinID:
BAO44108
UniProt:
A0A7U6JHV5
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Position
1291866..1293683
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AA seq
605 aa
AA seq
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MAESGTRAGALVLYKIRPAVVTSVGDKIEIRFEDGKTKRVREKDISLLHPGPGVDLKALE
GAEGNVEEAWELLEGEQASLEEVAELIYGEFTPASAWGVSQLLRDGLYFEGSVRNIRGRK
AEAVARDRAAREQKAREAREWAEFLDRAQQGTLEEADRSRLGEVERVALGQTARSRVLSA
LNITESPESAHAFLLRCGYWPASYNPWPARQGANLESPDLPLPPLEEEPRRDLTRLESWA
IDDEGNTDPDDAISLDGDRIWVHVADVAALVKPDSHLDLEARSRSANLYLPEGMVQMLPP
AATDVLGLGLQEESVALSFGFRINDAGEVTDIEITPSRVRVQRISYEAAEARLEEAAFAP
LLAITRRYRDARLARNAAQIRLPEVSVKVVEGEVLIRPLPRLASREMVTDAMLMAGEAAA
RFAEANGICIPYAVQPEPQEIRQPESMSESHAYRRLFKPSNAAMSPGRHFGLGLDYYART
TSPLRRYMDLVVHQQLRAFVTGGSPLEKEKVTERVAEAGAVGGIIRRAERLSNLHWKLIW
LKEQERWQGEAVILALEERKAVVMIPQLALETRIRRTEDMQLDQTLELQVQEVDVPAQAV
YFRRI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaatcaggaacaagggccggcgccctggtgttgtacaagatacgtcccgcggtg
gtgacctccgttggagacaagatcgaaatccgtttcgaggatggcaagaccaagcgggtg
cgggaaaaggacatttccctgttgcatcccggtccgggtgtggatctgaaagccctggaa
ggggccgaaggcaatgtcgaggaagcctgggaactgctggaaggcgagcaggcttccctg
gaggaagtggccgagctgatctatggtgaattcacccccgccagcgcctggggggtcagc
caactgctgcgtgacgggctgtattttgagggttccgtgcggaatatccgggggcgcaag
gcggaagccgtggccagggaccgggccgcacgggagcagaaagcccgggaggcccgggag
tgggcggagtttctcgaccgggcgcagcagggaaccctggaggaagcagaccgcagccgc
ctgggggaagtggagcgcgtggctctggggcaaacggccaggagccgggttctcagcgcc
ctgaacatcaccgagtctcccgagagcgcccatgcctttttactgcgatgcggctattgg
ccagcgtcctacaatccctggcctgcccgccagggggcgaacctggaatctcccgatctg
cccctgccgcccctggaggaagagccgcgccgggatctcacccgcctggagtcctgggcc
atcgatgatgaaggcaacacggatccggacgatgccatcagtctcgatggtgaccgaatc
tgggtgcatgtggcggatgtggcggctttggtgaaaccggattcccatctggatctggag
gcgcgttcccgcagcgccaatctctacctgcccgaaggaatggtgcagatgcttccgccc
gccgctacggacgtcctgggtctggggctgcaggaggaatccgtggccctgtctttcggt
ttccggatcaatgatgcgggggaggtcacggatatcgaaatcacccccagccgggttcgt
gttcagcgcatcagctatgaagctgcggaagcgcgtctggaagaggcggcttttgcgcct
ttgctggccatcacccgccgttaccgtgacgcgcgcctggcgcgcaatgcggcgcaaatc
aggctgccggaagtcagcgtcaaggtggtggaaggtgaagtcctgatccgccctctgccg
cgcctggcttcccgggagatggtcacggatgccatgctcatggcgggcgaagcggccgcg
cgttttgccgaggccaacggcatttgcattccctatgcggtgcagccggaaccccaggag
atccgtcagcctgagtccatgtccgaatcccatgcctaccgccgcctgttcaagcccagc
aatgcggccatgagcccgggccggcactttggcctgggtctggattactatgcccggacc
accagccccctgcgccgctacatggatctggtggtacaccagcaattgcgcgcttttgtt
accgggggaagtcccctggaaaaggagaaggttacggaaagagtggcagaagcaggcgcg
gtggggggcattatccgccgtgccgaacgcctgtccaatttgcactggaaactgatctgg
ctcaaggaacaggagcgctggcagggggaagctgtgattctggcgttggaagaacgcaag
gcggttgttatgattccacagctggctctcgaaacccggattcgccgtaccgaagacatg
cagctcgatcagaccctggagttgcaggttcaggaagtggatgtaccggcacaggccgtc
tatttccgcaggatctga
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