Thiolapillus brandeum: TBH_C1535
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Entry
TBH_C1535 CDS
T03600
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tbn
Thiolapillus brandeum
Pathway
tbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TBH_C1535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbn03019
]
TBH_C1535
03016 Transfer RNA biogenesis [BR:
tbn03016
]
TBH_C1535
Enzymes [BR:
tbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TBH_C1535
Messenger RNA biogenesis [BR:
tbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TBH_C1535
Transfer RNA biogenesis [BR:
tbn03016
]
Prokaryotic type
tRNA degradation factors
TBH_C1535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
KH_KhpA-B
DUF6226
Motif
Other DBs
NCBI-ProteinID:
BAO44454
UniProt:
A0A7U6JHG4
LinkDB
All DBs
Position
complement(1670029..1672122)
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AA seq
697 aa
AA seq
DB search
MTAIKKEFQFGDHKVTLETGEVARQADGAVIVNMDDTVVLCTVVGSKHAMEGRDFFPLTV
DYQEKTYAAGKIPGGFFRREGRPSEKEILVARLIDRPVRPLFPKGYTNETQIICTVMSLN
PYVDPEIPSLIGTSAALAISGLPFQGPIGAARVGYKDGQYLLNPPGTGLSEVTDLDLVVA
GTDSAVLMVESEARELSEEVMLGAVLFGHEQMQVAIEAIKELAEEVGKPTIEFSVPEEDS
DLAEKVAEIAGAGIGEAYSIVDKMDRYARLDEVKAATIEALCSGDDPQWSEDQVSAALNK
LKKKTVRSRILAGEPRIDGRDTRTVRNISIKTGVLPRTHGSALFTRGETQALVITTLGTE
RDAQIVDALDRSYREPFMLHYNFPPFCVGETGRVGSPKRREIGHGRLAKRGVLAVMPSME
DFPYSIRVVSEITESNGSSSMASVCGTSLSLMDAGVPVKAPVAGVAMGLIKEGDDFAVLT
DILGDEDHLGDMDFKVAGTENGVNALQMDIKIQGITREIMDIALTQAKDGRMYILEEMNR
AINAPRQEMSEHAPRIISFRIHPDKIRDVIGKGGATIRSITEETGATVDLDDSGLVKIFS
VDKAAGEKARKRVELITADVEVGTVYEGKVAKLMDFGAFVTILPGKDGLVHISQISEDRV
EKVSDKLSEGDIVKVKVLEVDKQGRIRLSMKAVGEGE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcaatcaaaaaagagttccagttcggcgatcacaaagtgacgctggaaaccggg
gaagtcgcccgtcaggcagacggtgcggtaattgtaaatatggatgataccgtggtgttg
tgcaccgtggtgggttccaagcatgcaatggaaggccgcgatttctttcctctgactgtc
gattaccaggagaagacctatgccgcaggcaaaattcccggcggtttcttccgccgtgaa
gggcggccatccgagaaagagattctggtggcgcggcttatcgatcgtccggttcgcccc
ttgtttcccaagggttataccaatgagacccagataatctgcacggttatgtctctgaat
ccttatgtggacccggagattccttccctcatcggaacctccgcagccttggctatctcc
ggcctgcccttccaggggcctatcggcgcggcacgggttggctacaaggatgggcagtat
ctgctcaatcctcccggcaccggattgagcgaagtgacggatctggatctcgtggttgca
ggcactgacagtgcggtgctgatggtggaatcagaagcgcgtgagctttctgaggaggtc
atgctgggcgctgtgttgttcggtcacgagcagatgcaggtggctatcgaagccatcaag
gaactggctgaggaagtgggcaagcccaccatcgaattcagtgttccggaagaggatagc
gacctggcggaaaaagtggctgagattgccggagcgggtattggcgaagcttacagtatc
gtggacaagatggatcgctatgccaggttggatgaggtcaaagcggccacaatcgaagcc
ctgtgctcgggtgacgatccccaatggtccgaggatcaggtttccgctgctctgaacaaa
ctgaaaaagaaaaccgtgcgtagccgtattctggccggtgaaccgcgtatcgatggcagg
gataccaggaccgtgcggaacatcagtatcaaaaccggcgttttgccgcgaacccatggc
tccgccctgttcacccgtggcgaaacccaggcactggtcattaccactctgggcaccgag
cgggatgcgcaaatcgtcgatgcccttgatcgctcttaccgtgagccgttcatgctgcat
tacaatttccctcctttctgtgtcggcgagaccggtcgtgtgggcagtcccaagcggcgt
gaaatcggtcatggccgtctggccaagcgcggcgtgctggcggtaatgcccagtatggaa
gattttccttattccatacgcgtggtatccgagattacggaatccaacggctcctcttca
atggcttcagtgtgcggcaccagtctctccctgatggatgccggcgtgccggtcaaggct
cctgttgccggtgtggccatgggcttgatcaaggaaggcgatgattttgccgtgcttacg
gatattcttggtgacgaggatcatctgggcgacatggacttcaaggttgccggtaccgag
aatggtgtcaatgctttgcagatggacatcaagatccagggcatcacccgtgaaatcatg
gatattgccctgacccaggcaaaagatggccgcatgtatatcctggaagagatgaaccga
gccatcaatgccccgcgccaggaaatgtctgagcatgcaccacgcatcatttccttccgc
attcatccggacaagattcgtgatgtcatcggcaagggtggggctaccatccgttcgatt
accgaagaaaccggtgcgacagtcgatcttgatgacagcggcctggtaaaaatcttttcc
gtggacaaggcggctggtgaaaaggcccgcaagcgtgtggaattgatcacagctgatgtg
gaagttggtaccgtctatgaaggcaaagtggccaagctcatggattttggtgccttcgtc
actatcctgccgggcaaagatggcctggtgcatatttcccagatcagcgaagatcgtgtc
gagaaggtcagtgacaaactttccgagggcgatatcgtcaaggtcaaggttctggaagtg
gacaaacagggtcgtatccgtctgagcatgaaagccgtaggtgaaggcgagtaa
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