Thiolapillus brandeum: TBH_C2219
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Entry
TBH_C2219 CDS
T03600
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tbn
Thiolapillus brandeum
Pathway
tbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TBH_C2219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbn03019
]
TBH_C2219
Enzymes [BR:
tbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TBH_C2219
Messenger RNA biogenesis [BR:
tbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TBH_C2219
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
DUF8086
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAO45130
UniProt:
A0A7U6JJT5
LinkDB
All DBs
Position
complement(2422406..2423707)
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AA seq
433 aa
AA seq
DB search
MSFDTLGLRAELLRAVSDQGYTQPTPIQKKAIPTILQGKDVMAGAQTGTGKTAGFTLPLL
QRLSETPLPKGKRPVRCLILAPTRELAAQVGESVEIYGRHLNLRSAVVFGGVKINPQIDK
LRRGVDVLVATPGRLLDHVSQKTVDLSRVEILVLDEADRMLDMGFIHDIRKVLALLPDNS
QRQNLLFSATFSREIKELAHRLLNQPELIEVAQRNTTAERIEQVVHPVDKRRKRELLSHL
IGSRNWRQVLVFTRTKHGANRLAQQLEKDGLTAAAIHGNKSQGARTRALAGFKNGDVRVL
VATDIAARGLDIDQLPHVVNFELPNVPEDYVHRIGRTGRAGNEGEAVSLVCVDEHKLLKD
IERLLKKPVPSVVLEGYEPDPSIKAEPIQNGRGNRGGRSAKPGRGAGKGPRGQKRGAAPG
GRGRGNRQRSARA
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcgatactctcggcctgagagccgaactcctgcgcgcggtaagcgatcagggc
tatacccaacctactcccatccagaaaaaagccattcccacaatactccagggaaaggat
gtcatggctggcgcccagacgggcaccggcaagaccgcgggctttactctacccctgttg
caacgtctgagtgagacgcccctgcccaagggcaaacgcccggtacgctgtttgatactg
gctccgacccgtgagctggccgcccaggtgggggaaagcgtggaaatctatggccgccat
ctgaatctgcgctctgccgtcgtattcggcggggtgaagatcaatccccagattgacaag
ttgcgccggggcgtggatgtactggtggcgacaccgggacgcctgctggatcatgtcagt
cagaagaccgtggatctgtcccgagtggaaatcctggtgctggatgaagccgaccgcatg
ttggacatgggtttcattcatgatatccgtaaagtgctcgcattgctgccggacaacagc
cagcggcagaacctgctgttctcagccaccttctcgcgggaaatcaaggagctggcccac
cgcctgctcaaccagcccgagctcatcgaagtggcccagcgcaataccacggcggaacgc
atcgaacaggtggttcatcccgtggacaagcgccgcaaacgtgaactcctgagccacctg
atcggctcccgcaactggcgtcaggtgctggtcttcacccgcaccaagcatggcgccaac
cgcctggcccagcagctggagaaggacggtctgaccgccgcggccattcacggcaacaag
agccagggcgcccgcacccgggctctcgccggtttcaagaatggtgatgtgcgggtgctg
gtggcgacggatatcgctgcccggggcctggatatcgaccagttgccccacgtggtcaac
ttcgagctgcccaacgtccccgaggactacgtgcaccgcatcggccgtaccggccgggcc
ggtaacgaaggtgaggcggtctccctggtctgcgtggacgagcacaagctgctcaaggat
atcgagcgcctgctgaaaaagccggtacccagcgtggtgctggaaggttacgagccggat
ccgtccatcaaggccgagcccatacagaatggccgtggcaacaggggcgggcgttctgca
aagcctggacgtggcgcaggcaaggggcctcgtggccagaagcgtggcgcagcaccgggt
ggcaggggtcgtggcaatcggcaacgctctgcccgggcctga
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