Thiolapillus brandeum: TBH_C2491
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Entry
TBH_C2491 CDS
T03600
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tbn
Thiolapillus brandeum
Pathway
tbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TBH_C2491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbn03019
]
TBH_C2491
03009 Ribosome biogenesis [BR:
tbn03009
]
TBH_C2491
Enzymes [BR:
tbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TBH_C2491
Messenger RNA biogenesis [BR:
tbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TBH_C2491
Ribosome biogenesis [BR:
tbn03009
]
Prokaryotic type
rRNA helicases
TBH_C2491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BAO45400
UniProt:
A0A7U6JKI0
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All DBs
Position
2690741..2692501
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AA seq
586 aa
AA seq
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MSTSSESPSFEELGLPSVLLKALGDIGYETPSPIQARCTPLLLEGRDLLGQAQTGTGKTG
AFALPLLANIDIRQKTPQLLVLTPTRELALQVAEAFQTYAHHMQNFHVLPIYGGQAFSQQ
LRLLKRGVHVVVGTPGRVMDHLRRKTLDLSGMRSLVLDEADEMLRMGFIDDVEWILEQTP
TSRQTALFSATMPEVIRRVAQKHLNDPVEVRIKSSTSTATTIHQRYWLVSGLHKLDALTR
LLETEDFDAMLIFARTRTSTVELADKLSARGYAAEALNGDIPQNQREKTVDRLKKGKLDI
LVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRKGEAILFVAPRERRLLR
AIEKATSQPIEQMHMPSTADINSRRVERFKQRIMDTLATADLGLYEEILADLRQEQDLDP
MALASALALMAQGNDPLLLTDRPVREKKARRERSGRDEKPAGKPARREFSTEPLPLKEFP
DLEMERFIVDVGYNHDVKPGNIVGAIANEADIDSCYIGCIEIHDEFTTVDLPEGMPREVM
EILKKARVAGKKMGLRPVGQTPDKKDNNHKRGRKHHRKSKKKPRSK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtctacatcttcagaatccccttccttcgaggaattggggctgccttccgttttgctc
aaggccctgggcgatatcggttacgaaaccccttcccccattcaggcccgctgcacgccc
ctgctgctggaaggccgcgatcttctcggccaggcgcaaaccggcacaggcaagaccggt
gcttttgccctgcccctgctggccaacatcgacatccggcagaagacgcctcaactactg
gtgcttacccctacccgggaactggccctgcaggtcgctgaagcgttccagacctatgcc
caccacatgcagaacttccatgtgctgcccatatatggcggacaggcgttcagccagcaa
ctgcgcctgctcaaacgaggggtacacgtggtagtcggcactccgggaagggtcatggat
cacctgcggcgcaagaccctggatctcagtggcatgcgcagcctggttctggatgaagcc
gatgaaatgctgcgcatgggctttatcgacgatgtggaatggattctcgagcaaaccccc
acatcccggcagaccgccctgttctccgccaccatgcccgaagtaatccgaagggtggcg
cagaaacatctcaacgatcccgtggaagtgcgcatcaaatcgagcaccagcacagccacc
accattcatcaacgctattggctggtgagcggcctgcacaagctggatgccctgacccgg
ctcctcgaaaccgaagatttcgacgccatgctcatcttcgcccgcacccgtacatccacg
gtcgagcttgccgacaagctgtctgcacgaggctatgcggcggaagcgttgaacggagat
attccccaaaaccagcgggaaaaaaccgtggaccgtctgaaaaaaggcaagttggacatc
ctggtggcgacagacgtggctgcccggggcctggacgtggaacgtatcagccatgtgctg
aactatgacatcccccacgataccgaatcctatgtacaccgaattgggcgcacgggccgc
gccggacgcaagggcgaggccattttgttcgtcgccccccgggaaagacgcctgttgcgc
gccatcgaaaaagccaccagtcagcccatcgagcaaatgcacatgccaagcacggcggac
atcaacagccgccgcgtggagcgtttcaaacaacgcataatggataccctggccactgca
gacctgggactctacgaagagattcttgcggatttgcgccaggaacaggatctggatccc
atggcactggcatcagccctggcactcatggcccagggtaatgatcctctgttgctcacg
gacaggccggtcagggaaaagaaagcccgcagggaacgcagtggccgtgacgagaaaccc
gcaggaaaaccggccaggcgcgagttctccaccgaacctctgcccctgaaggagtttccc
gatctggaaatggagcgctttatcgtggacgtgggttataaccatgacgtgaaaccaggc
aacatcgtcggcgccattgccaatgaagcggatatcgatagctgctacatcggctgcatc
gagatccacgacgagttcaccacggtggatctgcctgaaggcatgccccgggaagtcatg
gaaattctgaaaaaagccagagtcgccgggaagaagatgggcctacgccctgtcggacaa
acgccagacaagaaagacaacaaccataagcgcgggcgcaagcatcatcgcaagagcaaa
aagaaaccccgcagcaaataa
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