Thermoanaerobacter brockii: Thebr_2219
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Entry
Thebr_2219 CDS
T01409
Name
(GenBank) alpha amylase catalytic region
Organism
tbo
Thermoanaerobacter brockii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
X25_BaPul_like
SH3_3
Alpha-amylase_N
SH3_4
CBM_20
fn3
Trypan_PARP
Glucodextran_B
SH3_2
SH3_YKFC_2nd
Cadherin-like
GlgE_dom_N_S
Motif
Other DBs
NCBI-ProteinID:
ADV80725
UniProt:
E8US26
LinkDB
All DBs
Position
complement(2225027..2230051)
Genome browser
AA seq
1674 aa
AA seq
DB search
MFKRRTLGFLLSFLLIYTAVFGSMPVQFAKAETDTAPAIANVVGDFQSKIGDSDWNINSD
KTVMTYKGNGFYEFTTPVALPAGDYEYKVALNHSWEGGGVPSQGNLSLHLDSDSVVTFYY
NYNTSSVTDSTKYTPIPEEKLPRIVGTIQSAIGAGDDWKPETSTAIMRDYKFNNVYEYTA
NVPKGYYEFKVTLGPSWDINYGLNGEQNGPNIPLNVAYDTKITFYYDSVSHNIWTDYNPP
LTGPDNNIYYDDLKHDTHDPFFRSPFGAIKTGDTVTLRIQAKNHDLESAKISYWDDIKKT
RTEVPMYKIGQSPDGQYEYWEVKLSFDYPTRIWYYFILKDGTKTAYYGDNDEQLGGVGKA
TDTVNKDFELTVYDKNLDTPDWMKGAVMYQIFPDRFYNGDPLNDRLKEYSRGFDPVEYHD
DWYDLPDNPNDKDKPGYTGDGIWNNDFFGGDLQGINDKLDYLKNLGISVIYLNPIFQSPS
NHRYDTTDYTKIDELLGDLDTFKTLMKEAHARGIKVILDGVFNHTSDDSIYFDRYGKYLD
NELGAYQAWKQGDQSKSPYGDWYEIKPDGTYEGWWGFDSLPVIRQINGSEYNVKSWADFI
INNPNAISKYWLNPDGDKDAGADGWRLDVANEIAHDFWVHFRAAINTVKPNAPMIAELWG
DASLDLLGDSFNSVMNYLFRNAVIDFILDKQFDDGNVVHNPIDAAKLDQRLMSIYERYPL
PVFYSTMNLLGSHDTMRILTVFGYNSANENQNSQEAKDLAVKRLKLAAILQMGYPGMPSI
YYGDEAGQSGGKDPDNRRTFSWGREDKDLQDFFKKVVNIRNENQVLKTGDLETLYANGDV
YAFGRRIINGKDVFGNSYPDSVAIVVINKGEAKSVQIDTTKFVRDGVAFTDALSGKTYTV
RDGQIVVEVVALDGAILISDPGQNLTAPQPITDLKAVSGNGQVDLSWSAVDRAVSYNIYR
STVKGGLYEKIASNVTQITYIDTDVTNGLKYVYSVTAVDSDGNESALSNEVEAYPAFSIG
WAGNMNQVDTHVIGVNNPVEVYAEIWAEGLTDKPGQGENMIAQLGYRYIGDGGQDATRNK
VEGVEINKDWTWVDARYVGDSGNNDKYMAKFVPDMVGTWEYIMRFSSNQGQDWTYTKGPD
GKTDEAKQFIVVPSNDVEPPTALGLQQPGIESSRVTLNWSLSTDNVAIYGYEIYKSLSET
GPFVKIATVADTVYNYVDTDVVNGKVYYYKVVAVDTSFNRTASNIVKATPDIIPIKVIFN
VTVPDYTPDDGANIAGNFHDAFWNPSAHQMTKTGPNTYSITLTLNEGTQLEYKYARGSWD
KVEKGEYGEEIANRKITVVNQGSNTMVVNDTVQRWRDLPIYIYSPKDNTTVDANTNEIEI
KGNTYKGAKVTINDESFVQQENGVFTKVVPLEYGVNTTKIHVEPSGDKNNELTKDITITV
IREEPVQEKEPTPTPESEPAPMPEPQPTPTPEPQPSCNYGIVTASTLNLREGASITSKII
GTIPAGKVVKWLEEVNGWYKVDYNGKVGYVSTKYVSSVPDPSKVTVAKSVKVIVKSGLNV
RVSSSVAARKIGAVPYGTELKVVEERNGWYLVQYKDGFGYIYSVYTVDTKASVLKTVKVT
AKSGLNVRAGDSVKARKIGAVPYGTQLKVVGEYGAWYLIQYKNGFGYVYAKYTK
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaagaggagaacattaggctttttattgtcatttcttttaatttatacagcagtg
tttggctcaatgcctgtgcaatttgcaaaagctgagacagatacggcgcctgctatagcc
aatgttgttggcgattttcaatcaaagattggagattctgactggaatataaacagtgac
aaaacagtaatgacatataaaggtaatggcttttatgaatttactaccccagttgcgtta
cctgcaggtgattatgagtataaagttgctcttaatcattcatgggaaggtggaggagtt
ccttcacaaggtaatttaagcttgcatcttgattcagattctgtagtaactttttattac
aactataatacttcaagtgttactgattctacaaaatatacaccaattccggaagaaaaa
cttccaagaattgtaggtactatacaatcagcaataggagcaggtgatgattggaaacct
gaaacatcgacagctataatgagagactataagtttaacaatgtttacgaatacactgca
aatgttccaaaagggtattatgagtttaaagtaactttagggccctcatgggatataaat
tatggcttaaatggtgaacaaaatggtccaaatattcctttgaatgtagcctatgatact
aagattacattttactatgattcggtttcacataatatatggacagattacaatccacct
ctcacagggcctgataataacatatattatgacgatttaaaacatgacacccatgaccca
ttcttccgttcgcctttcggtgcaataaaaacaggtgatacagtgactttgaggatacag
gctaaaaatcatgaccttgagtcagctaaaatttcttattgggatgatattaaaaaaaca
agaacagaagtcccgatgtacaaaattggtcaaagtcctgacgggcaatatgaatactgg
gaagtgaagttaagctttgactatcccacaagaatttggtattactttatacttaaagac
gggacaaaaactgcttattacggagataacgatgaacaattaggtggagtaggtaaagcc
acagatacggtaaataaagactttgaacttactgtatacgataaaaatttagacacccct
gattggatgaaaggggcagtaatgtatcaaatattcccagatagattttacaatggtgac
cctttaaatgaccgcctaaaggaatacagtagaggttttgatcctgttgaatatcatgac
gactggtatgaccttcccgacaatccgaatgataaagataaacctggatatacaggggat
ggtatatggaataatgacttctttggtggtgatttacaaggtataaatgataaattggat
tatctaaaaaaccttggaatatcagttatttatctcaatccaattttccaatcaccttcc
aatcaccgatatgatacaaccgattacacaaagatagacgagttattgggagatttagat
acatttaaaacacttatgaaagaagcccatgcaagaggaattaaagtaatacttgatggc
gtcttcaatcatacaagtgatgatagtatttattttgatagatacgggaagtacttggat
aatgaattaggtgcttatcaagcctggaaacagggagatcagtcaaaatctccatacggt
gactggtacgaaattaagcctgacggtacctatgagggctggtggggatttgacagctta
ccggtaataaggcagataaacggaagtgagtacaatgtaaaaagttgggcagattttatc
ataaataatcctaatgcaatatctaagtattggttaaatcctgatggggataaagatgca
ggtgcagatggctggagattggatgttgcaaatgaaattgctcacgatttctgggttcat
tttagagctgcaattaatactgtgaaaccaaatgcgccaatgattgcagaactttgggga
gatgcttcattagatttacttggagattcttttaactctgttatgaactatctttttaga
aatgcagttattgattttatactcgataaacagtttgatgatggaaatgtggttcacaat
cctatagatgcagcaaaacttgaccaaaggcttatgagcatatatgagagatatcctctt
ccagtattttattctactatgaaccttttaggttctcatgacaccatgagaatattgaca
gtatttggatataactctgctaatgaaaatcaaaattctcaagaggcgaaagaccttgca
gttaagaggcttaaacttgccgcaatattgcaaatgggctatccgggaatgccttctatt
tactatggtgacgaggcaggacaatctggtggaaaagacccagataacaggagaacattc
tcttggggaagagaagataaagatctgcaggatttctttaagaaagtcgtaaacataagg
aatgaaaatcaagttttaaaaacaggagaccttgaaacactttatgcaaatggcgatgtt
tatgcctttggaagaagaattataaatggaaaagatgtatttggtaattcttatcctgac
agtgtagctattgttgtgattaataaaggtgaggcaaagtcagtacaaatagatactact
aaatttgtaagagatggagttgcttttacagatgccttaagtggtaagacatacacggtt
cgtgatggacaaattgttgtagaagttgtggcattggatggggctatactcatttcagat
ccaggacagaatttgacggcacctcagccaataacagaccttaaagcagtttcaggaaat
ggtcaagtagacctttcgtggagtgcagtagatagagcagtaagttataacatttaccgc
tctacagtcaaaggagggctatatgaaaaaatagcttcaaatgttacgcaaattacttat
attgatacagatgttaccaatggtctaaagtatgtgtattctgtaacggctgtagatagt
gatggaaatgaaagtgctttaagcaatgaagttgaggcatatccagcattttctattggt
tgggcaggaaatatgaaccaagttgatacccatgtaataggcgtaaataatccagttgaa
gtttatgctgaaatttgggcagaaggattaacagataaacctggccaaggggaaaatatg
attgcccagttaggatataggtatattggagatggtgggcaagatgctacacgcaacaaa
gtagaaggtgttgaaataaataaggactggacatgggttgatgcacggtatgtaggggat
tctggaaataacgacaaatacatggctaaatttgtacctgatatggtaggcacatgggaa
tatattatgagattttcctctaaccaaggacaggattggacgtatacaaaagggccagat
gggaaaacagatgaagcaaaacagtttattgtcgtgccatcaaatgatgtagaaccacct
acagctctaggcttacaacaaccaggaattgaatcctcaagagttacacttaactggagt
ctctcaactgataatgtagctatctatggctacgaaatatacaaatctttaagtgaaaca
ggaccatttgtaaagattgcaactgtggctgacactgtgtataactacgtagatacagat
gtagtaaatggaaaagtgtactattataaagttgtagcagttgatacttcttttaacaga
acagcatcaaatatagtgaaagctacacctgatataatacctatcaaagtgatatttaat
gtaacagtccctgattatactcctgatgacggtgcaaatattgctggaaacttccatgac
gctttctggaatccaagtgcccatcagatgacaaagacaggacctaacacttacagtatt
acattgactttaaatgaaggaacacagcttgaatataaatatgcaaggggcagctgggat
aaggtagaaaaaggtgaatatggagaggaaattgcaaatagaaaaataactgttgtcaat
caaggttcaaatacaatggtggtaaatgacacagtgcaaagatggagagacttaccaata
tacatttattctccaaaagataatactacagtagatgcaaatacaaatgagatagagatt
aaaggcaatacctataaaggtgcaaaagtaactataaatgatgaatcttttgtacaacaa
gaaaatggcgtatttacaaaagtagtgcctcttgaatacggtgtaaatactactaaaata
catgtggagccgagtggtgacaagaataatgaactcacaaaagatataacaataactgtt
ataagagaggagcctgtccaggaaaaagaaccaactcctacgccagagtctgagccagca
ccaatgcctgaaccacaaccgacaccaacaccagaaccacagccttcctgcaattatggc
attgtgactgcctcaacacttaatttaagagaaggagcaagtatcacaagtaaaattata
ggtactattcctgctgggaaagttgtaaaatggcttgaggaagtgaatggatggtacaaa
gttgactataacggcaaagtaggatatgtttcaaccaaatatgtttcttcagtgccagat
ccatcaaaggtaaccgttgcaaaatcagtgaaagttatagtgaagagcggattaaatgta
agggtgagcagttctgtagctgcaagaaaaataggggcagtaccatacgggacagaatta
aaagtagtagaagaacgtaatggttggtatttggtgcagtataaagatggttttggatat
atatatagtgtatatacagttgatacaaaggcatcagttctaaaaactgtaaaagttact
gcaaagagtggattaaatgtaagagcaggtgattccgtaaaagcaaggaaaataggagcg
gtaccttatggtactcagttaaaagtggtaggagaatatggtgcttggtacttaatccaa
tacaaaaatggttttggttatgtatacgcgaagtatacaaaatga
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