Thiocapsa bogorovii: LT988_00770
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Entry
LT988_00770 CDS
T07840
Name
(GenBank) SNF2-related protein
Organism
tbog
Thiocapsa bogorovii
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SWIM
ResIII
SNF2_assoc
DEAD
Motif
Other DBs
NCBI-ProteinID:
UHD16630
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Position
complement(159388..162708)
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AA seq
1106 aa
AA seq
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MPSAPLHLDPETLKHAIQSTYLERGRRYLKDRRVLSADHDVERGLVTGRVRGSAGRIYQC
IVQLGERADGALTVVGQCSCPVGYNCKHVAAVLLSLGTRPKSATLPAAARALPFQLKSWL
DQIERATGVPDEEPHRILYFIDPQEHLGVRRTRVRAAKVRQLLAGGYGKPQDFNLLGHSK
ASFIGPEDQRIMGLLSVARGGGDPTASYLDTLTGADVMAAITRTGRGYLRSIDGPVLRDA
GPLAGRLEWRLGDDARLHVILEAGRQGLLLLPMSPPWYLDPSTGDCGPIETGLDDREAGV
LAAAPVVAPESVEALEAAARERFKGRVVHLPKSPERRRSRTEIPVPRLRLRSVDLAASSV
GRYWGIQRPPEWAHHAVLDFAYGDTSVDPRDRAPVLRRVEQGVLVDVERRPDAERAAIDL
LEASGFHRTAETSDAHGLWLERADPESWIDFMQNELPDLAAQGWLIEIEEGFHFRIAEIG
DWEMDIAEGEGGHWLDVGLGVEVDGQRVDLLPLLVELIGRYQVDLSTRTLAAMDAETRLQ
LRLPDGRLILMPVERLRPILSTLIELYDPEGSPGSQASKGRLRLSRVHAAQLAELEAAAP
GLRWRGGDAVREWGRRLRDFKGLETIALPLGLTVELRPYQRQGLDWLQFLREYGLGGILA
DDMGLGKTVQTLAHLLVEKESGRADRPSLVVAPTSLLFNWRREAERFAPALRVLSLHGAT
RHTRFAAIPEHDLVLTSYPLLPRDLDPLAKRDFHLLILDEAQNIKNPRSKAAQAARGLNA
RHRLCLTGTPMENHLGELWSLLDFLMPELLGDERRFRRLFRIPIERHGDDVRQDELRRRV
APFLLRRTKETVAAELPPKTEIIREVPLADDQRDLYETLRLALHEKVREEVARKGLARSG
IIILDALLKLRQVCCDPRLVSLESARRVKGSAKLDLLMTLLPELLEEGRRVLLFSQFTSM
LALIEEELTKGGLCEDQDFVKLTGRTRNRDRPVDRFQAGEVPLFLISLKAGGTGLNLTAA
DTVIHYDPWWNPAAERQATDRAHRIGQDKPVFVYKLLTEGTVEQRVADLQARKQALADAM
LAGGGAATGTLSPDDLDLLFAPLSDD
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgctcccctgcacctcgatcccgaaaccttgaaacacgcgattcagtcgacc
tacctggagcggggtcggcgctatctcaaagatcggcgcgtattgagcgcggatcacgat
gtcgagcgcgggctggtgacggggcgggtgcggggctcggccgggcggatctatcagtgc
atcgtgcaactcggtgaacgggccgacggagccctcacggtcgtcggacaatgctcctgt
ccggtggggtacaactgcaagcacgtggcggccgtgttgttgtccttggggacgcggccc
aagagcgctaccttgccggctgcggcgcgcgcgctgccgtttcaattaaagagctggctc
gatcagatcgagcgtgcgacgggcgttccggacgaagagccccatcggatcctctatttc
atcgatcctcaggagcacctcggggtcaggcgcacacgagtgcgtgcggcaaaggtgcga
cagctgctcgccggcggctacggcaaaccgcaggatttcaatctcctcggccactccaag
gcgagcttcatcggtccggaagaccaacgcatcatggggttgctctccgtcgcgcgaggt
ggcggcgatccgactgcctcctatttggatacgctgaccggtgccgatgtcatggcggcc
attacacggaccgggcgcggttatctgcgctcgatcgacggtccggtcctgcgtgacgcg
ggcccgcttgcggggcgcctggagtggcgcctcggcgacgatgctcggctgcacgtgatc
ctcgaggccggccgccagggtctcttgctgctgccgatgtcgccgccctggtatttggat
ccaagtaccggcgactgcggcccgatcgagaccggcctcgatgaccgcgaggccggcgtc
ttggctgcagccccggtggttgcgcccgagtcggtcgaggcgctggaggcggctgcgcgg
gagcgtttcaagggtcgggttgttcacctgcccaagagccccgagcgacgtcgcagccgc
acggagatccccgtcccccgtctgcgcctgcgcagcgtcgaccttgcggcgagcagcgtg
gggcggtactggggcatccagcgtccgcccgagtgggcccatcatgcggtgctcgatttc
gcctacggcgacacctcggtcgatccgcgcgatcgcgcgccggtgctgcgccgcgtggag
cagggcgtgcttgtggatgtcgagcggcgacccgatgccgaacgggcggcgatcgacctg
ctcgaggcgtcgggcttccatcgcactgcggagacatccgatgcccatggtctctggctc
gaacgtgccgacccggaatcctggatcgattttatgcagaacgagttgcccgacctcgcc
gcacagggttggctgatcgagatcgaggagggcttccactttcggatcgccgaaatcggc
gactgggagatggacatcgcagagggcgagggggggcactggctcgacgtcggattgggc
gtggaggtcgacgggcaacgggtcgacctgcttccactgctggtggaactgatcgggcgc
taccaggtggatctctcgacgcggaccctcgccgcgatggacgctgagacacgcttgcag
ctgaggttgccggacgggcggctgatcctgatgccggtggagcgcctgcggcccatcctc
tcgaccttgatcgagctgtacgaccccgagggttcgccgggctcacaggcgagcaagggc
cgcttgcgtctgtcgcgggtccatgcggcccagctcgcggagctggaggcggcggccccg
gggctgcgctggcggggcggggatgcggtgcgcgaatggggtcgacggctccgtgacttc
aaaggcctggagaccatcgcgctaccgttgggactgaccgtcgagcttcgcccctatcaa
cgccaaggactcgactggctgcagtttttgcgcgaatacgggctcggcggcatcctcgcc
gacgacatgggtctcggcaagacggtgcaaaccctggcccatctgctggtcgagaaggag
agcgggcgagcggatcgcccgagcctggtggtcgcgcccacgagtctgctcttcaactgg
cgccgcgaggccgagcgtttcgccccggcgctgcgtgtcctgtcgctgcacggcgcgacg
cgacacacgcgtttcgcggcgatcccggagcatgacctggtgttgacgagctatccgctg
ttgccccgtgatctggacccacttgcgaagcgggatttccatctactcatcctggacgaa
gcccagaacatcaaaaatccacgcagcaaagcggcgcaggcggcccgcgggttgaacgcc
cggcatcggctctgcctgaccggcacgcccatggaaaaccacctcggtgagctttggtca
ctgctcgattttctgatgcccgagctgctcggagacgagcgccgctttcggcggctgttc
cgaattcctatcgagcgtcatggcgacgatgtgcggcaggacgagctgcgtcggcgggtc
gcccccttcctcttgcgccgcaccaaggaaacggtcgccgccgagctgccgccgaagacc
gagatcattcgagaggtccccctcgcagacgatcagcgcgacctctacgagaccctgcgg
ctggccctgcacgagaaggtgcgcgaggaggtcgcccgcaaggggctcgcgcgcagcggg
atcatcatcctggacgccctgctcaagctgcgtcaggtctgctgcgatccgcgtctggtg
tcgctcgagagtgcgcgcagggtgaaaggctcggccaagctggatcttctgatgaccctg
ctgcccgagctgctcgaggaggggcggcgagtgctgctcttctcccaattcacgagcatg
ctggccttgatcgaggaggagctgaccaagggcggcctgtgcgaggatcaggacttcgtg
aagctgaccggacgcacccgcaatcgcgaccgtccggtcgatcgtttccaggcgggtgag
gtgcccctgtttctgatcagcctcaaggccggcggcacggggctgaatctcaccgcagcg
gacaccgtgatccactatgacccctggtggaacccggcggccgagcgccaagcgaccgac
cgggctcatcgcatcggtcaggacaagcctgtgtttgtctacaagctgttgaccgagggc
actgtcgagcagcgtgtggccgatctgcaggcacgcaaacaggccctcgccgacgccatg
ctcgcgggtggcggtgccgcaacgggcaccttgagtccggatgacctcgatctcttattc
gccccactctcggacgactga
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