KEGG   Thiocapsa bogorovii: LT988_01405
Entry
LT988_01405       CDS       T07840                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
tbog  Thiocapsa bogorovii
Pathway
tbog00260  Glycine, serine and threonine metabolism
tbog00460  Cyanoamino acid metabolism
tbog00630  Glyoxylate and dicarboxylate metabolism
tbog00670  One carbon pool by folate
tbog00680  Methane metabolism
tbog01100  Metabolic pathways
tbog01110  Biosynthesis of secondary metabolites
tbog01120  Microbial metabolism in diverse environments
tbog01200  Carbon metabolism
tbog01230  Biosynthesis of amino acids
tbog01240  Biosynthesis of cofactors
tbog04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:tbog00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    LT988_01405
  09102 Energy metabolism
   00680 Methane metabolism
    LT988_01405
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LT988_01405
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    LT988_01405
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    LT988_01405
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    LT988_01405
Enzymes [BR:tbog01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     LT988_01405
SSDB
Motif
Pfam: SHMT Beta_elim_lyase Aminotran_1_2 OKR_DC_1 DegT_DnrJ_EryC1 Cys_Met_Meta_PP
Other DBs
NCBI-ProteinID: UHD16747
LinkDB
Position
complement(301910..303166)
AA seq 418 aa
MFEKSMQISDYDPELWGAIQDEERRQEEHVELIASENYASPRVMAAQGSVLTNKYAEGYP
GKRYYGGCEHVDVAEQLAIDRAKKLFGADYANVQPHSGSQANAAVFMALCEPGDTVLGMS
LAHGGHLTHGAKPNFSGKIYHAVQYGLDPATGEIDYAEVERLAREHRPKMIIAGFSAYSR
IVDWARFRTIADAVGAYLMVDMAHVAGLVAAGVYPSPVQIADVTTTTTHKTLRGPRGGLI
LAKANPELEKRFNSLVFPGTQGGPLMHVIAAKAVAFKEALEPSFKVYQQQVVLNAQTMAE
VFLSRGYDVVSGGTNDHLFLVSFIEQGLTGKDVDAWLGAANITVNKNAVPNDPQSPFVTS
GIRVGTPAITTRGFGTDEAGDLAGWMCDLIDARGDQATIDAVKTKVLALCKRFPVYER
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgttcgaaaaaagcatgcagatcagcgactatgatcctgagctctggggtgcaatccag
gacgaggagcgtcgccaagaggagcacgtcgagctcatcgcctcggagaactatgccagc
ccgcgcgtgatggcggctcagggcagcgttctgaccaacaagtacgccgagggttatccg
ggcaagcgctactacggcggctgcgagcatgtcgacgtggccgagcagttggcgatcgat
cgcgccaaaaaactgttcggcgccgactatgccaacgtccagccgcattccggctcccag
gccaacgcggcggttttcatggccctgtgcgagcccggcgacacggtgctcggcatgagc
cttgcgcacggcggtcacctcacccacggtgccaagccgaacttctcgggcaagatctac
cacgcggtccagtacggtctggatcccgcgaccggcgagatcgattacgccgaggtcgag
cgtctggcccgggagcatcgcccgaagatgatcatcgccggcttctcggcctactcgcgg
atcgtcgattgggcgcgcttccggaccatcgccgatgccgtcggcgcctatctgatggtc
gacatggcccatgtcgccggcctggtcgccgccggcgtctacccgagcccggtgcagatc
gccgacgtgaccacgaccaccacccacaagaccctgcgcggtccgcgcggcggcttgatc
ctggcgaaggccaatccggagcttgaaaagaggttcaactcgctggtcttcccgggcacc
cagggcggtccgctgatgcatgtgattgctgccaaggcggtggccttcaaggaggcgttg
gagccgagcttcaaggtctaccagcagcaggtcgttctgaacgctcagacgatggccgag
gtctttctctcgcgaggctacgatgtggtctcgggcggcacgaacgaccatctctttctg
gtcagctttatcgagcagggtctgaccggcaaggacgtcgacgcctggttgggcgcggcc
aacatcacggtcaacaagaatgcggtgcccaacgatccgcaatcgcccttcgtcaccagc
ggcatccgtgtcggcacgccggccatcaccacgcgtggtttcgggaccgacgaggccggc
gatctggccggttggatgtgcgacctgatcgatgcgcggggcgatcaagccaccatcgat
gcggtcaaaaccaaggtgttggcgctctgcaaacgctttcccgtctacgagcgttga

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