Thiocapsa bogorovii: LT988_01405
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Entry
LT988_01405 CDS
T07840
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00260
Glycine, serine and threonine metabolism
tbog00460
Cyanoamino acid metabolism
tbog00630
Glyoxylate and dicarboxylate metabolism
tbog00670
One carbon pool by folate
tbog00680
Methane metabolism
tbog01100
Metabolic pathways
tbog01110
Biosynthesis of secondary metabolites
tbog01120
Microbial metabolism in diverse environments
tbog01200
Carbon metabolism
tbog01230
Biosynthesis of amino acids
tbog01240
Biosynthesis of cofactors
tbog04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LT988_01405
09102 Energy metabolism
00680 Methane metabolism
LT988_01405
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LT988_01405
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LT988_01405
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LT988_01405
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LT988_01405
Enzymes [BR:
tbog01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LT988_01405
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
OKR_DC_1
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
UHD16747
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Position
complement(301910..303166)
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AA seq
418 aa
AA seq
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MFEKSMQISDYDPELWGAIQDEERRQEEHVELIASENYASPRVMAAQGSVLTNKYAEGYP
GKRYYGGCEHVDVAEQLAIDRAKKLFGADYANVQPHSGSQANAAVFMALCEPGDTVLGMS
LAHGGHLTHGAKPNFSGKIYHAVQYGLDPATGEIDYAEVERLAREHRPKMIIAGFSAYSR
IVDWARFRTIADAVGAYLMVDMAHVAGLVAAGVYPSPVQIADVTTTTTHKTLRGPRGGLI
LAKANPELEKRFNSLVFPGTQGGPLMHVIAAKAVAFKEALEPSFKVYQQQVVLNAQTMAE
VFLSRGYDVVSGGTNDHLFLVSFIEQGLTGKDVDAWLGAANITVNKNAVPNDPQSPFVTS
GIRVGTPAITTRGFGTDEAGDLAGWMCDLIDARGDQATIDAVKTKVLALCKRFPVYER
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaaaagcatgcagatcagcgactatgatcctgagctctggggtgcaatccag
gacgaggagcgtcgccaagaggagcacgtcgagctcatcgcctcggagaactatgccagc
ccgcgcgtgatggcggctcagggcagcgttctgaccaacaagtacgccgagggttatccg
ggcaagcgctactacggcggctgcgagcatgtcgacgtggccgagcagttggcgatcgat
cgcgccaaaaaactgttcggcgccgactatgccaacgtccagccgcattccggctcccag
gccaacgcggcggttttcatggccctgtgcgagcccggcgacacggtgctcggcatgagc
cttgcgcacggcggtcacctcacccacggtgccaagccgaacttctcgggcaagatctac
cacgcggtccagtacggtctggatcccgcgaccggcgagatcgattacgccgaggtcgag
cgtctggcccgggagcatcgcccgaagatgatcatcgccggcttctcggcctactcgcgg
atcgtcgattgggcgcgcttccggaccatcgccgatgccgtcggcgcctatctgatggtc
gacatggcccatgtcgccggcctggtcgccgccggcgtctacccgagcccggtgcagatc
gccgacgtgaccacgaccaccacccacaagaccctgcgcggtccgcgcggcggcttgatc
ctggcgaaggccaatccggagcttgaaaagaggttcaactcgctggtcttcccgggcacc
cagggcggtccgctgatgcatgtgattgctgccaaggcggtggccttcaaggaggcgttg
gagccgagcttcaaggtctaccagcagcaggtcgttctgaacgctcagacgatggccgag
gtctttctctcgcgaggctacgatgtggtctcgggcggcacgaacgaccatctctttctg
gtcagctttatcgagcagggtctgaccggcaaggacgtcgacgcctggttgggcgcggcc
aacatcacggtcaacaagaatgcggtgcccaacgatccgcaatcgcccttcgtcaccagc
ggcatccgtgtcggcacgccggccatcaccacgcgtggtttcgggaccgacgaggccggc
gatctggccggttggatgtgcgacctgatcgatgcgcggggcgatcaagccaccatcgat
gcggtcaaaaccaaggtgttggcgctctgcaaacgctttcccgtctacgagcgttga
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