Thiocapsa bogorovii: LT988_01570
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Entry
LT988_01570 CDS
T07840
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LT988_01570 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbog03400
]
LT988_01570 (mutS)
DNA repair and recombination proteins [BR:
tbog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LT988_01570 (mutS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
UHD16779
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Position
334486..337074
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AA seq
862 aa
AA seq
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MDKPDQSAHTPVMQQYLRLKAEYPDMLLFYRMGDFYELFFEDAERAARLLDITLTKRGQS
AGRPIPMAGVPYHAAEAYLARLVRKGVSVAICEQIGDPAKSKGPVERKVVRLVTPGTLTD
EALLDDRRENLLTAIAEGRDNYGLAFSELSSGRFSVLEVATREALASELERLKPAEVLVG
EDSRLPELLRIDRGVTRRPSWHFDRDTGERLLCDQFGTRDLNGFGCTGLDLAIGAAGCLL
QYVRDTQFAALPHLRGLTTEQRDEALILDAATRRNLEITESLGGRPEHTLAGVLDRTATA
MGSRLLRRWLGRPLRSRSDVQSRHAAIGTLIDTGVQTDLQTVLAGIGDLERILSRIALRS
ARPRDLAALRDALAVLPDLRAPLDGCDDPLLLTLAEAIGTHPEVLDLLRRAIITQPPMLI
RDGGVIASGLDPELDRLRELSSNADRFLLDLETRERERTGISGLKVGYNRVHGYFIELGR
SQADQVPEDYIRRQTLKGVERYVTPELKRFEDEVLSSRERALAREKALYEDLLGTLAGSL
APLQASAEAIATLDVLANLAERARALDWTRPRLTDEAIIEIEDGRHPVVETVLDDPFIAN
GLRLDRRRRMLVITGPNMGGKSTYMRQNALIVLLAFSGSYVPARTASIGPIDRIFSRIGA
SDDLAGGRSTFMVEMEETANILNNATAQSLVLMDEVGRGTSTFDGLSLAWSCAVELATRI
GAYGLFATHYFELTTLPEEYPGIANVHLDAVEHGARIVFMHALREGPANQSYGLAVAALA
GVPTPVIARARVRLRELEAGARRHAERDAVQLSLFPPDPEPAAPHPLLEVMETIEPDSLT
PRAALDLLYRLKDLSADRPSVA
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggataaaccagatcagagtgcacacaccccggtgatgcagcagtacctccgcctcaag
gcggagtatccggacatgctgctcttctatcggatgggcgatttctatgagctgttcttt
gaggacgccgagcgcgccgcgcggctgctggacatcaccctgaccaagcgagggcagtcg
gcgggtcggccgatcccgatggcgggcgtaccctaccacgccgccgaggcctatctggcg
cgcctggtccgcaagggtgtctccgtggcgatctgcgagcagatcggtgacccggccaag
agcaagggcccggtcgagcgtaaggtggtacgcctggtcaccccggggaccctgaccgac
gaggccttgctcgacgatcggcgcgagaacctgctgacggcgatcgccgaagggcgtgac
aactatggcctggcgttttcggaactgtcgagcgggcggttctcggtcctggaagtggcc
acccgcgaggctttggcgagcgaactggagcgcttgaagccggccgaggtcttggtcgga
gaggacagccggctacccgagttgctgcgcatcgaccgaggtgtcacccgccgcccgagc
tggcacttcgaccgcgacaccggcgaacgtctactctgcgatcagttcggcacccgcgat
ctgaacggcttcggctgcacggggctggatctcgccatcggcgccgcgggttgtctgctg
caatatgtccgcgacacccagttcgccgccctaccccatctgcgcgggctcaccaccgag
cagcgcgacgaggccctgatcctggacgccgcgacccgtcgcaacctggagatcaccgag
agtctcggcggacggcccgagcacacgctggccggcgtgctcgatcggaccgcgactgcg
atgggcagccgtctgctgcgacgctggctcggtaggcctttgcgctcgcgatcggacgtg
cagtcgcgtcatgccgcgatcggcaccttgatcgacacgggcgtccaaaccgacttgcag
acggtcctcgccgggatcggggatctcgagcgcatcctctcgcgtatcgcactgcgctcg
gcgcgtccgcgggatctggccgcgctgcgcgatgccctggccgtgctgccggatctgcgt
gcaccgctcgacggctgcgacgatccgctgcttctgactctcgccgaggcgatcggcacc
caccccgaggtgctggatctgcttcggcgcgcaatcatcacccaaccccccatgctgatc
cgagacggcggcgtcatcgcatccggcctcgacccggagctcgatcggctgcgtgagctc
tcgagcaacgcggaccgttttctactcgacctggagacccgcgagcgcgagcgcaccgga
atctccgggctgaaggtcggctacaaccgcgtccacggctatttcatcgagctcggtcgc
agtcaggccgatcaggtcccggaggactacatccgccgccagacgctcaaaggcgtcgag
cgctatgtcacgcccgagctcaaacgcttcgaggacgaggtgctgagcagccgagagcgc
gcactggcccgcgagaaggcactctacgaggatttgctaggcaccctcgccgggtcgctc
gcgcccctgcaagcgagcgccgaggctatcgcgacgctggacgtgctggcgaatctggcc
gagcgcgcgcgggcactggactggacccgtccgcgcctgaccgacgaggcgatcatcgag
atcgaagacggacgtcatcccgtggtggagacggtcctcgacgaccccttcatcgccaac
ggactgcgtctggatcgccgccgtcgcatgctggtcatcaccgggcccaacatgggcggt
aaatccacctatatgcgccagaatgccctgatcgtgctgctcgcctttagcgggagctac
gtcccggcgcgcaccgcgtccatcggcccaatcgaccgcatcttctcgcgcatcggcgcc
tccgacgacctcgccggcggacgctcgaccttcatggtggagatggaagaaacggccaac
atcctcaacaatgcgaccgcccagagtctggtcttaatggacgaggtcgggcgcggcacc
agcaccttcgacgggctttcgctcgcttggtcgtgcgctgtggagttggccacgcgcatc
ggtgcctacggtctcttcgcaacccactatttcgagctgacgacattgcccgaggaatat
ccgggtatcgccaacgtccacctcgacgcggtggagcacggtgcccgcatcgtcttcatg
cacgccctacgcgagggcccggccaatcagagctacggcctggcggtcgccgcactcgcg
ggcgtcccgaccccggtgatcgcgcgtgcacgcgtacgattgcgcgagctggaagccggc
gcgcgacgccatgcggagcgcgatgccgtgcagctctcgctcttcccgcccgatcccgag
cccgccgcgccgcatccgcttttggaggttatggagaccatcgagccggacagcttgacg
cctcgagcagccttggatctgctgtatcgcctgaaggatctctcggccgatcgtccatct
gtcgcttga
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