Thiocapsa bogorovii: LT988_02480
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Entry
LT988_02480 CDS
T07840
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00900
Terpenoid backbone biosynthesis
tbog01100
Metabolic pathways
tbog01110
Biosynthesis of secondary metabolites
Module
tbog_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LT988_02480 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tbog01006
]
LT988_02480 (ispA)
Enzymes [BR:
tbog01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LT988_02480 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LT988_02480 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
LT988_02480 (ispA)
Prenyltransferases [BR:
tbog01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LT988_02480 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
UHD16947
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All DBs
Position
513319..514212
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AA seq
297 aa
AA seq
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MTDATLDDFRARCCARVEATLDTLLPSASVQPVRLHEAMRYTVLGGGKRIRPLLAYAAGE
ALGVDPALLDRPACAVELIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDEATAILAGDAL
QTLAFQALAESPGLDAAKRIDMVASLARASGARGMVGGQALDLAAEGSVLDVAMLEHIHI
HKTGALIRAAVQMGILAHDAPDPDHAERLDRYAKCIGLAFQIQDDVLDVEGDTDLIGKTA
GRDQVLEKATYPALVGLPEAKEMAATLIADALESIKIFSSGAEPLRWIAGALIGRKH
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgccactctggacgacttccgcgcgcgatgctgcgcccgggtcgaagccacg
ctcgacacgctgctgccgtctgcaagcgtgcaaccggtccgtctgcacgaggccatgcgc
tacacggtcctcggcggcggcaagcgcatccgtccgctcctggcctacgccgccggcgag
gcactcggtgtggatcccgccctgctcgaccgccctgcctgtgccgtcgagctcatccat
gcctactccctaatccacgacgacctcccggcgatggacgacgacgatctgaggcggggg
cgcccgacctgtcatcgcgccttcgacgaggcgaccgcgatcctggccggcgatgcactc
cagaccctcgccttccaggcgttggccgagtcgcccgggctggatgccgccaaacgcatc
gacatggtcgcaagcctcgcgcgcgcgagcggggcacgcggcatggtcggcggtcaggcg
ctcgatctagctgcagaaggcagcgtcctggacgtcgccatgctcgagcacatccacatc
cacaagaccggcgcgctcatcagggcagccgtgcaaatgggcatactcgcccacgatgcg
cccgacccggatcacgccgaacgtctcgatcgctacgccaaatgtatcggtcttgccttt
cagattcaggacgacgtcctcgacgtcgagggcgacaccgacttgatcggcaagacggcc
ggccgcgatcaggtcctggagaaggcgacttaccctgccctcgtcgggctgcccgaagcc
aaggagatggccgctaccttgattgccgatgcccttgaaagtataaagattttttcatcc
ggtgccgagcccctgcgctggatcgccggcgcgctgatcgggcgtaagcactga
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