Thiocapsa bogorovii: LT988_02525
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Entry
LT988_02525 CDS
T07840
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
tbog
Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tbog03016
]
LT988_02525 (tcdA)
Transfer RNA biogenesis [BR:
tbog03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LT988_02525 (tcdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
DAO
NAD_binding_7
FAD_binding_3
ApbA
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
UHD16956
LinkDB
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Position
complement(519858..520718)
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AA seq
286 aa
AA seq
DB search
METLDTHAQLDSEVSVGREARFGGIARLYGAAESARIAELHVCVVGVGGVGSWAAEALAR
TGVGAITLIDDDTIEPGNVNRQSHAVTSQFDRPKVEVMADRIRDIHPLCRCEPIRDFVTD
RTLEAYLSRGYDAVIDAIDSIRFKAAIIAYCTAQRLPIVTTGGAGGRRDPTAVRVADLSR
TEHDPLASKVRRRLREAYGFPRDPKRRFKVDCVYSLEQPVYPRADGCVSHQKPGISGVSL
DCRLGYGSASFVTATFGFAAVARVIEMSLKPRPERQARFQSGLDLA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggagacattggacactcatgcgcagctcgattcggaggtttcggtcgggcgcgaggcg
cgtttcggcgggatcgctcggctctacggtgcggcggagagcgcgcggatcgccgagctg
catgtctgtgttgtcggcgtgggcggggtaggctcttgggcggcggaggcactcgcgcgc
acgggcgtgggtgccattaccttgatcgacgacgacacgatcgagccgggcaacgtgaat
cggcagagccatgccgtgaccagccagtttgatcggccgaaggttgaggtcatggccgac
cgtatccgggacatccatccgctttgccggtgcgagccgatccgcgacttcgtgaccgat
cggacgctcgaggcgtatctgagccgcggctatgacgcggtcatcgacgcgatcgacagc
atccggttcaaggcggcaataattgcctactgcacggcgcaaaggctcccgatcgtcaca
accgggggggcaggcgggcgccgcgacccgaccgcggtcagggtggccgatctgagccga
acggagcatgacccactcgcctcgaaggtgcggcgccgcttgcgcgaggcgtatggattt
cccagagacccgaaacggcgtttcaaggtcgactgcgtctactcgctcgagcagccggtg
tatccgcgggcggatggatgtgtcagccatcaaaagcccggcatcagcggcgtctcgctc
gactgtcggctcggctatgggtcggcaagcttcgtgacagcgacgttcgggttcgccgcc
gtggcgagggtgatcgagatgtcgcttaaaccgcgcccggagcgacaggcaaggtttcaa
tccggtctagacctggcatga
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