Thiocapsa bogorovii: LT988_02745
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Entry
LT988_02745 CDS
T07840
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
tbog
Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tbog03000
]
LT988_02745
Transcription factors [BR:
tbog03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LT988_02745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
HTH_24
HTH_20
HTH_AsnC-type
HTH_28
HTH_5
HTH_30
Motif
Other DBs
NCBI-ProteinID:
UHD16996
LinkDB
All DBs
Position
complement(565080..566015)
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AA seq
311 aa
AA seq
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MHVSLRQLKVFEAVARHLSYTRAAEELHLSQPAVSMQVRQLEEEAGLSLFERLGNRILLT
EAGREVYDYGRTINSALQEMEEVLESLKGVSRGRLHLAVASTVNYFAPRLLAIFHQRYPG
IGLQLDVTNREQLVRMLCDNTVDLVLMGVPPTDMDVESEAFMANPLVVIAPPGHPLASEP
AISLAQLAEEVFVMREPGSGTRQTMERFFGERGLAIRHGMQMTRNEAVKQAVRSGLGLSV
VSLHTIELELETRRLVMLDVQGFPDQRQWYLVYRRGKRLSPAANAFREFVLTEAALIAAP
KSLSRLSEGGA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgtctcgctccggcaacttaaggtcttcgaggcggtggcgcgccacctcagttac
acgcgagccgccgaggagttgcatttgagtcagccggcagtctcgatgcaggtgcggcag
ctcgaagaggaggccggattgtccctgttcgagcgtctcggcaatcgcatcctgctgacc
gaggccggtcgggaggtctacgactacggccggaccatcaacagcgcattgcaggagatg
gaggaggtgctcgagtccctgaaaggggtcagccgaggtcggctgcaccttgcggtcgcg
agcacggtcaactactttgcgccgcgcctcttggcgatcttccatcagcgctacccgggg
atcggtttgcagctcgacgtcaccaatcgcgagcaactggtgcgcatgctgtgcgacaac
acggtcgatctcgtgttgatgggggtgcctccgactgacatggatgtcgagtccgaggca
ttcatggcaaacccgttggtggtgatcgcgccgcccggtcatccgctcgcgagcgagccg
gcgatcagtctcgcgcagctggccgaggaggtcttcgtgatgcgcgagcccggctcgggt
acgcggcagacgatggagcgcttcttcggcgagcgcggtctagcgatccgccacgggatg
caaatgacccgcaacgaggccgtgaaacaggcggtccgctccgggctggggctgagtgtc
gtgtcgctccataccatcgagctggagctcgagacccggcggctggtcatgctggatgtg
cagggcttcccggaccagcggcagtggtatctggtctatcgccggggcaagcgcctctcg
cctgcggccaacgcctttcgggagttcgtgctgacggaggccgcactcatcgccgcgccc
aaaagcctttctcggctgtcggaaggtggcgcctga
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