Thiocapsa bogorovii: LT988_03940
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Entry
LT988_03940 CDS
T07840
Name
(GenBank) DegQ family serine endoprotease
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog01503
Cationic antimicrobial peptide (CAMP) resistance
tbog02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LT988_03940
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
LT988_03940
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tbog01002
]
LT988_03940
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tbog03110
]
LT988_03940
Enzymes [BR:
tbog01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
LT988_03940
Peptidases and inhibitors [BR:
tbog01002
]
Serine peptidases
Family S1: chymotrypsin family
LT988_03940
Chaperones and folding catalysts [BR:
tbog03110
]
Other chaperones and cochaperones
DegP / HtrA
LT988_03940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin_2
PDZ_6
PDZ_2
Trypsin
PDZ
PDZ_1
Peptidase_S29
Motif
Other DBs
NCBI-ProteinID:
UHD17215
LinkDB
All DBs
Position
complement(852203..853675)
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AA seq
490 aa
AA seq
DB search
MKRHLVSVAILSAAILAGPAQALDGGVESLRETGKAFASVGRAVSPSVVFVQVEGQRQAT
AQAPLGLPFGDELPFGDEFFKRFFGEGFPGIPRGQGPGAPPSEPRSMGQGSGFVFAAESG
LLTDKTYIMTNNHVVEGAERIRVTFQDGREFDAEVTGRDPQSDVAVIEIKTGGLPALALG
DSAKLEVGEWVVAIGNPFGLSHTLTVGVVSATGRTSLGINDYEDFIQTDAAINPGNSGGP
LVDLDGAVVGMNTAIFSRSGGYMGVGFAIPINLANAIANQLIEQGEVTRGFLGIVIQPLT
ADLAESFGMQQGEGILIAQVTEDSPAGKAGLRQGDVIVAYRGEPVTDVGNFRNRVALTPP
GSSQELTIVRDGQRQTLDVTIGTLNAEALASSSPTQTSEELGLTLQNLTPQLAEQFGGQA
GEGVLVTEVKPGSIAATAGIEPGTLILQVNREWVKSVADFQQAVKAGRETGRVLLLVRKD
DMQRYVVLSW
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggcatcttgtgagtgtagcgatactttcggcggcgattctcgcgggccccgcg
caggccttggacggcggtgtcgagagtctgcgcgagaccggcaaggcgtttgcctcggtc
gggcgggcggtgtctccgtccgtggtcttcgtccaagtcgaaggccaacggcaggccacc
gcgcaggctcccctcggcttgcccttcggcgatgagctgcctttcggggacgaattcttc
aaacgcttcttcggcgagggctttccgggaatcccgcgcggccaaggacctggagccccg
cccagcgagccgcgctcgatggggcagggctcgggattcgtgttcgccgcagagagtggt
ctcctcaccgacaagacctacatcatgaccaacaatcacgtcgtcgagggtgccgagcgg
atccgcgtcacctttcaggacggacgtgaattcgatgccgaggtgaccggccgtgaccct
cagtccgacgtggccgttatcgagatcaagaccggcggcctgcccgcactcgctctgggc
gactcggcgaaactcgaggtcggcgaatgggtggtcgcgatcggcaatcccttcgggctg
agtcacaccctcacggtcggcgtggtcagcgccaccgggcgtaccagcctcggcatcaac
gactacgaggacttcatccagaccgacgccgctatcaacccgggtaactcgggggggccg
cttgtcgatctcgacggcgccgtggtgggcatgaacaccgccatcttcagtcgcagcggc
ggctatatgggcgtcggtttcgccatcccgatcaatctcgccaacgccattgccaaccag
ttgatcgagcaaggcgaggtgacgcgcggattcctgggcatcgtcatccagccgctgacc
gcggaccttgccgaatccttcgggatgcagcagggcgaggggattctgatcgcacaggtc
acggaagacagtcccgccgggaaggccggtctgcgccaaggcgacgtcattgtcgcttat
cgcggcgagcccgtgacggatgtcggcaacttccgaaaccgcgtcgccctcacgccgccc
gggagcagtcaggagctcaccatcgtgcgcgacgggcaaaggcagaccctcgatgtcacc
atcgggacgctgaacgccgaagcccttgcatcctcctcgcccacccaaaccagcgaggaa
ctgggtctcaccctacagaatctcacgccgcagcttgccgagcagttcggcggtcaggcc
ggcgagggcgttctggtcacggaggtgaagccgggatcgatcgccgcaaccgcggggatc
gagccgggcacactgatcctgcaggtcaatcgcgaatgggtgaagagcgtcgcggacttt
cagcaagcggtgaaggcggggcgcgagaccggacgggtgctgctgctggtccgtaaggac
gatatgcagcgctacgtggttctgagctggtag
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