Thiocapsa bogorovii: LT988_04005
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Entry
LT988_04005 CDS
T07840
Name
(GenBank) mechanosensitive ion channel
KO
K22051
miniconductance mechanosensitive channel
Organism
tbog
Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tbog02000
]
LT988_04005
Transporters [BR:
tbog02000
]
Other transporters
Pores ion channels [TC:
1
]
LT988_04005
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
SHE3
Motif
Other DBs
NCBI-ProteinID:
UHD17227
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All DBs
Position
complement(863877..867347)
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AA seq
1156 aa
AA seq
DB search
MNGDLRRRRAAIPRQPRRLPALGLWLLASVAPLATAQQAIQDASVPVTVETLEAKIAETE
SASGLPEEPKNRLLSLYRRALSNLEEAMADRAAAESFRETLQTAPAEAQAIRETLTEPAV
AEDTPPLQDSVPLPDLEAFLQQDKGDLALTEKRLADLSNRLDEAAARSAAIRQRLQAAEA
EQTENLAQRQLVAASGEASAESQARRWALDTHAEALAAEIDMLRQELLSQPARTGLLEAK
RDKAARDAAAIGRRVAQLEEGITQRRQADAERAKVAAEATRLEAEGRHPLVVRLAERNAA
LSGDVAETVAHLDEIRLQTESTRRLQQQLDGDFESAREVIAIGGANLSGKLGNLLRQQRQ
SLPDLRTFERAAREREEKASEIGVKRVLNRREQQRLADTDAYLGTLLAEAGADDALAPMR
ARLVALVDERQAVLEKAIESEDVMLRKLGELENAQSDLLATIKRFEELLDVNLLWVRSAS
RAQLDELGALPDQVWRIVSPSGWTGVAGVLAHQATHSAVFVLLGVVLAAFLWGRKHLIRF
IETTSERLGKPTTDRFAYSVQVLVVTLVAAAAWPLVAAVAGWQLRVSPRATDFSMAVGGA
LVALAMQFYFLRALRLICIPRGLAAAHFRWPEPNLRLLRRELDRLSWTYLPAAGVLLVIV
HLDPLNNGWAVGRVAFVILAVSLAFAFFRLLHPRSGVFAHAAGRSEERKLPFLYPFWYSL
LVIAPLALGVLELLGYLYTAQILLGRYVQSTWMVVALLLLAALAQRWVKVTRRRIAFNKA
MERRRAAEAARQRDAEQRDGDNGAGLTEVEEPEVDLDALSDTTGGLITTAVVTAGVVGLW
IIWSDVIPALRVLDNVSLWQQTVNVDGEERLDPITLADLGLALVIGVATFVFAKQLPAVL
EMILLRSADVTAGSRYTVTTLTTYAIITVGLLVVFGLIGVQWSQLQWLVAALGVGIGFGL
QEIVANFISGLIILFERPVRVGDIVTVGDTDGVVTKIQIRATTIRNWDRKELLVPNKEFV
TGRLLNWSLSDQMTRVVVVAGVAYGSDVDKALALMREAAQEHEHVLDDPAPVLSFEGFGD
NSLTLILRAYLSSIDYRIATITDLHKAINRKFADAGIVIAFPQRDLHMDTSRPLQVELLQ
RPGDPGVLGSDQSGAT
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgacctccggcggcgccgcgccgcaatcccccggcagccgcgtcgcctcccg
gcgctcggtctctggctgctggccagcgttgcgccgctcgccaccgctcagcaagcgatc
caggacgcgtccgtcccggtgacggtggagaccctcgaagcgaagatcgccgagaccgag
tcggcgtccggtctgccggaggagcccaaaaaccggctgctctccctctaccgacgggcg
ctgagcaacctggaagaggcgatggcggatcgagccgccgcggagagctttcgggagaca
ttgcagacggcgccagccgaggcgcaggccattcgcgagacgctgactgagccggccgtc
gccgaggacaccccgccgctacaggattcggtcccgcttcccgacttggaggcattcctg
caacaggataaaggcgatctcgcgctgaccgagaagcggctggcggacctgtcgaaccga
ctcgacgaggcggccgcccgctccgccgcgatccgtcagcgtctgcaagcggccgaagcg
gaacagaccgagaaccttgcccagcgacagttggtggcggcctccggggaggcctccgcg
gagtcgcaggcgcggcgatgggcgttggacacccatgccgaagccttggccgccgagatc
gacatgctccgtcaggagctcctgagccagccggcccggaccgggctgttggaggcgaaa
cgcgacaaggcggcgcgagatgcagcagcgatcggtcggcgagtcgcgcagttggaagaa
gggatcacgcagcggcggcaagccgacgctgagcgcgccaaggtggcagcggaggcgaca
cgcctggaagcggaaggccgacaccccttggtcgtgcggctcgccgagcgcaatgccgct
ctgtccggcgatgtcgccgagaccgtcgctcacctcgacgagatccggcttcagaccgag
tcgacccggcggctgcaacaacaactcgacggtgacttcgagagcgcccgggaggtcatc
gcgatcggcggcgccaacctcagtggcaagcttggcaacctgctgcggcagcagcgtcaa
tccctgcctgacctgcgcacgttcgagcgtgcggcacgggagcgcgaggagaaggcgagc
gagatcggcgtcaagcgcgtcctgaaccggcgcgagcagcagcgactggcggacacggac
gcctacctcggcacgctgctggccgaagcgggtgcggatgatgcgctggcgccaatgcgg
gcacggctcgttgcgctcgtcgacgagcgccaggccgtgctggagaaggccatcgagtcc
gaggacgtgatgctgcgcaagctcggcgagctcgaaaacgcgcaatcggacctcctggcg
acgatcaaacgcttcgaggagttgctcgatgtgaacctgctctgggtgcgcagtgcctcc
cgcgcccagctcgacgagctcggggcactgcccgatcaggtctggcggatcgtttcgccg
agcggttggaccggggtcgccggcgtgctcgcccatcaggccacgcactccgccgtcttc
gtcctgctcggcgttgtccttgccgcattcctgtggggtcgcaagcacctgatccggttc
atcgagaccaccagcgagcggcttggcaagccgacgaccgaccgcttcgcctacagcgtg
caggtgctcgtcgtcacccttgtcgctgctgccgcctggcctttggtcgcggcggtcgcg
ggctggcagcttcgggtctcgccccgggccaccgacttctccatggccgtgggcggggca
ctcgtcgcgctggccatgcagttctatttcctgcgtgcgctgcggctcatctgcatcccg
cgagggctcgcggcggcccacttccgctggccagagcccaacctccggttactccgacgc
gagctggaccgcttgtcctggacctacctgccggcggccggggtgctcctggtcatcgtc
cacctcgatccgctcaataacggctgggcggtggggcgcgtcgcctttgtgattctcgcc
gtctccctggccttcgcgttcttccgcctgctgcacccgaggtcgggcgtcttcgcgcac
gcggcgggacgctccgaggagcggaagctgccgttcctgtacccgttctggtattcgttg
ctcgtcatcgctcccctggcgctcggggtacttgagctgctggggtacctctatacggcg
caaatcctcctcggccggtacgttcagagcacctggatggtggtcgcgctgctcctcctg
gcggcactggcgcaacgctgggtcaaggtcacacgccggcgcatcgccttcaacaaggcg
atggagcgccgccgagccgcagaggcagctcgccaacgcgacgccgaacaacgtgatggc
gacaacggtgccgggctgacggaggtggaagagccggaggtcgatctcgacgccctcagc
gatacgaccggcggtctgatcacgaccgccgtcgttacggccggggtcgttggtctatgg
atcatctggtccgatgtcatcccggcgttgcgtgtactggacaacgtcagcctttggcaa
cagaccgttaacgtcgacggcgaagaacggctcgacccgatcaccctggccgatctcggt
ctcgcgttagtcatcggcgtagcaaccttcgtcttcgcaaagcagctccctgcggtgctg
gagatgatcctgctgcggagcgccgacgtgacggccgggagccgctacaccgtcacgacc
ttgaccacctatgccatcatcaccgtcggtctgctggtggtctttggactcatcggcgtc
cagtggtctcagctgcaatggctggtggcagcgctcggcgtcggcatcggcttcggcctg
caggagatcgtcgccaacttcatcagcgggctgatcatcctgttcgagcgtccggtcagg
gtgggcgacatcgtcaccgtcggcgataccgatggcgtcgtcaccaagatccagattcgg
gcgaccacgattcgcaactgggaccgcaaagagctcctggtgccgaacaaggaattcgtc
accggacgactgctcaactggtccctgtccgaccagatgacgcgggtggtcgtcgtcgcc
ggcgtggcctacggcagcgatgtcgacaaggccctggcgctgatgcgcgaggcggcacaa
gagcacgagcacgtcctcgacgatcccgcccccgttctgagtttcgagggcttcggcgac
aactccctcacgctgatcttgcgcgcctatctgagctcgatcgactatcggatcgccacc
atcaccgatctgcacaaggcgatcaatcgcaagttcgcggacgccgggatcgtcatcgct
tttccgcagcgcgatctgcatatggatacctccaggccgctgcaggtggagttgttgcag
aggccgggcgatcccggggtcttgggctcagatcaatccggcgcgacttag
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