Thiocapsa bogorovii: LT988_04625
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Entry
LT988_04625 CDS
T07840
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00020
Citrate cycle (TCA cycle)
tbog00190
Oxidative phosphorylation
tbog00650
Butanoate metabolism
tbog00720
Other carbon fixation pathways
tbog01100
Metabolic pathways
tbog01110
Biosynthesis of secondary metabolites
tbog01120
Microbial metabolism in diverse environments
tbog01200
Carbon metabolism
Module
tbog_M00009
Citrate cycle (TCA cycle, Krebs cycle)
tbog_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
tbog_M00149
Succinate dehydrogenase, prokaryotes
tbog_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LT988_04625 (sdhA)
00650 Butanoate metabolism
LT988_04625 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LT988_04625 (sdhA)
00720 Other carbon fixation pathways
LT988_04625 (sdhA)
Enzymes [BR:
tbog01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LT988_04625 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Thi4
Pyr_redox_2
Lycopene_cycl
FAD_binding_3
NAD_binding_8
GIDA
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
UHD17339
LinkDB
All DBs
Position
complement(1008737..1010500)
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AA seq
587 aa
AA seq
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MGIPTRHFDALIIGAGGAGLNAALQLAGADLRVAVVSKVFPTRSHTVAAQGGVNAALANV
LPDSWHWHMFDTVKGSDYLGDQDAIEFMCREAIPTVYELEHAGVPFSRLDDGKIYQRAFG
GQSQNFGGDQAARTCAAADRTGHAILHTLYQQNIRARTHFFDEFFAIDLVRDAEGIICGA
LVLEIETGEPLLIESKATLLATGGWGQVFRTTSNAHINTGDGAAMALRAGIPLMDMEFFQ
FHPTGIAGKGMLITEGTRGEGGYLINKDGERFMERYAPRAKDLASRDVVSRAIVTEVKEG
RGCGENGDYVMLKLDHLGEAVISKRLPGIRESSQIFAGVDPVIEPIPVFPTAHYAMGGIP
TDRFGRVAMPAGHGSEEVVVGLYAAGECACASVHGANRLGGNSLLDILVFGRLAGKDIID
YVRENPYQRAVDSASLEQAMGRLGRWEQTGDGPTVGQLRADFRKCMEDHAGVFRTEEIMT
EGYNKLCELRDRLPEARLTDQSKVFNTARIEALELENMMDVGMSIAVSALHRQESRGAHS
RPDHPARDDQTWLKHSLYYREGDRMDYKPVRTKPLTVESFPPKERVY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgggaattccgacacgtcacttcgacgctctcatcatcggcgccggcggcgcgggactg
aacgccgcacttcaactggccggtgctgatctgcgcgtcgccgttgtctccaaggtcttt
ccgacgcgttcgcacacggtggcagcccagggcggggtgaacgccgcgctcgccaacgtc
ttgccggactcctggcactggcacatgttcgataccgtcaagggttcggactatctcggt
gaccaagacgcgatcgagttcatgtgccgagaggccatcccgacggtctacgagctcgag
catgcaggcgtacccttctcgcgtctcgacgacggcaagatctaccagcgcgccttcggt
ggtcagagccagaacttcggcggcgatcaggcggcgcgcacctgcgccgccgccgatcgc
acgggtcatgcgatcctgcacaccctctatcagcagaacatccgggcgcggacccacttc
ttcgacgagttcttcgccatcgacctggtgcgggatgccgaagggatcatctgcggtgca
ctggtgctcgagatcgagaccggcgaaccgctcttgatcgagtccaaggcgaccctgctc
gccaccggcggctggggtcaggtcttccgcacgacctcgaatgcgcacatcaacaccggc
gacggtgccgcgatggccttgcgtgccggcatcccgctgatggatatggaattcttccag
ttccacccgaccggcattgccggcaaagggatgctgattaccgagggcacgcgcggggag
ggcggttatctcatcaacaaggacggcgagcgcttcatggagcgctatgccccgcgcgcc
aaggacctagccagccgcgacgtggtctcgcgtgcgatcgtcaccgaggtcaaggaaggg
cgcggctgcggcgagaacggcgactatgtgatgctcaagctcgaccatctcggcgaggcg
gtcatctccaaacgtctccccggtattcgcgagtcgagccagatctttgcgggtgtcgat
ccggtcatcgagcccatcccggtcttcccgaccgctcactatgccatggggggtatcccg
accgaccgcttcggtcgggtcgccatgccggcgggccatggctccgaggaggtcgtggtc
ggtctctacgcggccggcgagtgcgcttgtgcctcggtgcacggcgccaatcgtttgggc
gggaactcgctgctcgacatcctggtgttcggtcgattggcgggcaaggacatcatcgac
tatgtccgcgagaacccctatcaacgcgccgtcgactccgcgagcctggagcaggcgatg
ggtcgcctgggccgatgggaacaaacgggagacggccctacggtcgggcagctgcgcgcc
gatttccgcaagtgtatggaagatcacgccggtgtgttccggaccgaggagatcatgacc
gagggctacaacaagctctgcgagctgcgcgaccgactccccgaggcacgtctgaccgac
cagtccaaggtcttcaataccgcccgaatcgaggcgctggagctggagaacatgatggat
gtcggcatgtcgatcgcggtctcggcgctgcatcggcaggaaagccgaggtgcccactcg
cgaccagaccatcctgcgcgcgacgaccagacctggcttaaacacagcctttactaccga
gagggcgatcgtatggactacaaaccggtgcgcaccaagcccttgacggtcgagtccttc
ccgccgaaggagcgggtttactag
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