Thiocapsa bogorovii: LT988_05445
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Entry
LT988_05445 CDS
T07840
Name
(GenBank) acetyl-CoA carboxylase biotin carboxylase subunit
KO
K01959
pyruvate carboxylase subunit A [EC:
6.4.1.1
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00020
Citrate cycle (TCA cycle)
tbog00620
Pyruvate metabolism
tbog00720
Other carbon fixation pathways
tbog01100
Metabolic pathways
tbog01120
Microbial metabolism in diverse environments
tbog01200
Carbon metabolism
tbog01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LT988_05445
00620 Pyruvate metabolism
LT988_05445
09102 Energy metabolism
00720 Other carbon fixation pathways
LT988_05445
Enzymes [BR:
tbog01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
LT988_05445
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Dala_Dala_lig_C
ATP-grasp
RimK
ATP-grasp_3
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
UHD17495
LinkDB
All DBs
Position
complement(1209030..1210448)
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AA seq
472 aa
AA seq
DB search
MLRKILIANRGEIAVRVIRACAEMGIRSAAIYSDADRHSLHVKKADEAYSLGSDPLAGYL
NVHNIVNLAVATGCDAVHPGYGFLSENPELARACVRRGLTFIGPTAEVIARMGDKTEARL
AMQKAGVPVTPGSPGNLENLDAALRCAEEIGYPVMLKATSGGGGRGIRRCDDPKALRNNF
ERVISEATKAFGRAEVFLERCVVNPRHIEVQILGDHHGNCVHLFERDCSIQRRNQKLIEI
APSPQLDEAQRQYVNGLAVIAARAVGYTNAGTVEFLLDDDGRFYFMEMNTRIQVEHTITE
TITGVDLVEEQIRVAAGLPLRFKQHEIGRRGYAIQFRVNAEDPKNNFLPSFGRISRYYAP
GGPGVRTDGAIYTGYTVPPHYDSMLAKVIVWALNWDDVVNRSHRALRDMGLYGVRTTIPF
YQEILRHPDFRSGQFNTGFLDAHPELLNYSTKRRREDIAAALAAAVAAHAGL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgaaagatcctgatcgccaatcgcggcgagatcgcggtgcgcgtgattcgcgct
tgtgccgagatgggcatccgctcggcggccatctattcggacgccgaccgtcattcgctc
catgtgaagaaggccgacgaggcttacagcctcggcagcgatccgctggctggctatctc
aacgtccacaacatcgtgaatctggccgtcgcgaccggttgcgacgccgtccatccgggc
tacggctttctgtccgagaatccggagcttgcgcgggcctgcgtgcgacgtggcctgacc
ttcatcggaccgactgccgaggtgatcgcccgcatgggcgacaagaccgaggcgcgcctc
gcgatgcagaaggccggtgtcccggtgacgcccggcagccccggcaatctcgaaaacctg
gatgcggcgttgcgctgtgccgaagagatcggctatccggtgatgctcaaggcgacctcg
ggcggcggcgggcgcgggatccgccgttgcgacgatcccaaggcgttgcgcaacaacttc
gagcgggtgatctcggaggccaccaaggcgttcggacgtgccgaggtcttcctcgagcgc
tgcgtggtcaacccgcggcacatcgaggtgcagatcctcggggatcatcacggcaactgc
gtgcatctgttcgagcgcgactgctccattcaacggcgcaaccagaagctgatcgagatc
gcaccctctccgcagctcgacgaggcgcagcgccagtacgtcaacgggctggcggtgatc
gcggcgcgagccgtgggttacaccaatgcgggcaccgtcgagttcttgctggacgacgac
gggcgtttctactttatggagatgaacacccgtatccaggtcgagcacaccatcaccgag
acgatcacgggcgtggacttggtcgaggagcagatccgtgtcgcggccggtttgccgctg
cgcttcaagcagcacgagatcggtcggcgcggttacgcgattcaatttcgcgtcaacgcc
gaagacccgaaaaacaacttcctgcccagtttcgggcgcatctcgcgctactacgcgccg
ggcggtccgggcgtgcggaccgacggggccatctacaccggctataccgtcccgccgcat
tatgattcgatgttggccaaggtcatcgtctgggcgctcaactgggacgacgtggtcaac
cgcagtcaccgcgcgctgcgcgacatggggctctacggtgtgcgaacgacgatcccgttt
tatcaggagatcctgcgtcatccggattttcgctccgggcagttcaacacggggttcctc
gacgcccacccggagctcctgaactactccaccaagcgccgccgcgaagacatcgccgcc
gccctcgccgccgccgtcgcggcgcacgcgggcctttaa
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