Thiocapsa bogorovii: LT988_05685
Help
Entry
LT988_05685 CDS
T07840
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K21136
membrane fusion protein, multidrug efflux system
Organism
tbog
Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tbog02000
]
LT988_05685
Transporters [BR:
tbog02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LT988_05685
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
HH_MFP_RND
RND-MFP_C
BSH_Fcp1
HH_YBHG
HH_EMRA
BSH_CzcB
YknX_C
CzcB_C
HH_CzcB
Beta-barrel_RND
BSH_RND
Phage_scaffold
OEP
Motif
Other DBs
NCBI-ProteinID:
UHD17541
LinkDB
All DBs
Position
complement(1259871..1261058)
Genome browser
AA seq
395 aa
AA seq
DB search
MSTLLTGCLPTDEEASQPVPEPIRPVRVVTVEELPGGERVTLTGNIQAQDDVALAFRVGG
QLIERTVNVGDQVVAGQVVARLDAVNERNAVDAARANLAAAMARLVEARNTVRRFEPMLP
QGFVARADFDRAVEARDAAQAQVEAAQAQVATAENQLGFTTLLADGPGTVTERGAEPGEV
VAAGRMIVRLAREAGRDAVFDVPARVIESGSADDEVTVALSSDPTVTTSGRVREVSPQAD
PVTRTFQVRVGLANPPAAMRLGSTVTGSIQLGGAAGIEIPNSALTSARGAPAVWVLDPQT
NTVALRNIDVARFELDRVLIAQGLDAGELVVTAGVQTLRPGQQVRRLGEPVPDETEAETS
EPAVGQVGEPTSGEAGDDTGDTASEPSVEKAEARP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgaccctgctcaccggttgcctgccgaccgacgaggaggcgtcccagccggtgccg
gaacccatccgcccggttcgggtcgtgacggtcgaggagctgcctggcggggagcgcgtg
accttgaccggcaacatccaggctcaggacgatgtcgcgctggcctttcgggtcggcggg
cagttgatcgagcgcaccgtcaacgtcggcgaccaagtggtcgccggccaggtggtcgcg
cgcctggacgcggtcaacgaacgcaacgcggtggatgcggcgcgcgcaaacctggccgcc
gccatggcgcgtctcgtggaggcccgcaacacggtgcgacgcttcgagccgatgctgccg
cagggcttcgtcgcccgcgcggacttcgaccgggcggtcgaggcgcgcgacgccgcccag
gcgcaagtcgaggcggcccaggcccaggtcgcgaccgccgagaaccagctcggcttcacc
accttgctggccgatggaccgggcacggtcaccgaacgcggcgccgagcccggcgaggtg
gtcgcggccgggcgcatgatcgtccgcctggcccgcgaagctggccgcgacgcggtgttc
gacgtgccggctcgggtcatcgagtcgggctccgccgacgacgaggtcacggtcgccctg
agcagcgaccccacggtcaccaccagcggacgcgtgcgcgaggtctcgccccaggccgac
ccggtgacacgcacctttcaggtccgcgtcgggctggccaatccgccggccgccatgcgc
ctcggttccaccgtgaccggcagcatccagctcggcggcgcggccggtatcgagatcccg
aactcggccctgacctcggcccgcggggcgccggcggtctgggtgctggacccgcaaacc
aacaccgtggccctgcgcaacatcgacgtcgcgcgcttcgagctggaccgggtgctgatt
gcgcagggtctcgacgccggcgagctagtcgtcaccgccggcgtccagaccctgcgcccc
ggccagcaggtgcgccgactcggcgaaccggtccctgacgagaccgaagccgagaccagc
gaaccagccgttggtcaggtgggtgaaccgaccagtggcgaggccggcgacgacactggt
gataccgccagcgagccgtctgtcgaaaaggccgaggcccgcccatga
DBGET
integrated database retrieval system
