KEGG   Thiocapsa bogorovii: LT988_05710
Entry
LT988_05710       CDS       T07840                                 
Name
(GenBank) type II toxin-antitoxin system VapC family toxin
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
tbog  Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:tbog00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tbog03016]
    LT988_05710
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tbog02048]
    LT988_05710
Transfer RNA biogenesis [BR:tbog03016]
 Prokaryotic type
  tRNA degradation factors
   LT988_05710
Prokaryotic defense system [BR:tbog02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    LT988_05710
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: UHD17546
LinkDB
Position
1265335..1265733
AA seq 132 aa
MSGLLMLDTNALSAVMKARSPDLDLRLSIEPFCISVVTEGEIRFGLARRPQRVGFTALAE
AVLSRIDIRPWNSTTARRYGPLRAELTALGRPLAPLDLMIAAHAMAEGATLITADRAFAH
VPGLAIQNYEQV
NT seq 399 nt   +upstreamnt  +downstreamnt
atgagcggcctgctgatgctggacaccaacgcgttgtcggcggtcatgaaggcccgttct
cccgacctagacttgcgcctctccattgagccattctgcatttccgtggtcaccgagggc
gagattcgcttcggcctcgcacgccgcccgcaaagggtcggatttacagcgctcgccgag
gccgtactgagccgcatcgacattcgcccatggaactccacaacggcgcgtcgttacggt
ccgttgcgcgccgagctgaccgccctcggcaggcccctggctccgctggacctgatgatt
gccgcccacgccatggccgagggcgccaccctgatcaccgccgaccgcgccttcgcccat
gtccccggtctggccatccagaactacgagcaagtctaa

DBGET integrated database retrieval system