Thiocapsa bogorovii: LT988_05985
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Entry
LT988_05985 CDS
T07840
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
tbog
Thiocapsa bogorovii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
UHD17597
LinkDB
All DBs
Position
complement(1328419..1331187)
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AA seq
922 aa
AA seq
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MMTRSLLFLVLVTLVASHTLAADNGPSAHALGRFDAATGVYTVVSGDALSAIAARFGMSL
AQIDQQNDLSTNQIQVGQKLVVAPHSLGVPARDNPPGDNPMLQSTQESAPAAAASSDLPP
DPWPRKVQALGRTLLVYQPQVESWNDNRLKLRSAVAVESKGNREDAFGVIHAEARTQVDR
EQRMVVLQDLAITKADFPTLPELANTLAADVDKEFGSQLRIIPLDRLEASLGIAKVDHGG
AVAVQNPVPRVIVSQRPAILVPIQGSPVLKPAADADTPVQRIINTRAVILTTGENQPFYL
HLLDGWVTAPTLAGPWVHAEITPAGIDAVASQLAARGEADLLNGSPSTPTVDLLAAGIPD
VYVSQTPTELIVFQGQPDLVPIDGTALLRAKNTSADVFVDTDDNSYYALMAGRWYRAPDL
NGPWAFVASTDLPVDFKQIPPQSTAGVVLSTVAGTPQAREAVIANTIPQTATIPRKANDG
PVFTAKFDGPPTIGLLQGTDLEYAVNSETPIIRVNGEMYYALQDGVWFQSPSFDGPWELS
TAVPDAIYAIPPSSPLHYVTYVHIYDSTPEVIYEGYTPGYLGTVQSTDGVVVYGTGYDYQ
PWIGDAWYAAPETFGLAAQPVYNPAAGYAFGFGLGLATAAMAEPYWGGAYYRPYDMGYGC
CGVTSANVYRQWGNTVAAGTRTWYDRADGTLGTGARGDYSNWRTGTSGRYAAGRSYNPYT
GVAQRGYGRSFDTAGGVDGGVARGERYNPATGVRSYGSRMAASGPDGDSVSRDSVRASGP
FGGTAAAHQTTFSNPRTGETRTLDTARVGNNLYAGADGNVYRNTGNEWQRHEDGGWQDAG
DAGWADREQQARSLGDDRLNSGFGFDDRFGGFGFGEGDFDNRFGGGGFGGAGPGGGAFGG
RFGGGFGDRFGGGFGGRFHGRR
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgatgacccggtctttgctgtttctcgtactcgtcaccttggtcgccagtcacacactt
gccgctgacaatggccccagtgcccatgcgctcggccgtttcgatgcggcaaccggtgtc
tacacggtggtcagcggcgatgcgctcagcgccatcgccgcccgcttcggcatgtcgctg
gcccaaatcgatcagcagaatgacctgtcgacgaaccagatccaggtgggtcagaagctg
gtggttgccccgcatagcctcggcgttccggcaagggacaatccgccgggcgacaatccg
atgctccaatcgacacaggaatcggcgccggcagccgccgcttcatcggacctgcctccg
gacccttggccgcgcaaggtccaggcgcttggtcgtaccctgttggtctatcagccgcag
gtcgagagttggaatgacaacaggctgaagctgcgcagcgcggttgcggtcgagtctaag
gggaatagggaagacgccttcggcgtgatccacgccgaagcgcgcacccaggtcgaccgg
gaacaacggatggtggtgctccaagacctcgccatcaccaaggcggacttcccgaccctc
cctgagcttgcgaacaccctggccgcggatgtggataaggagttcggcagtcagctgcgc
atcatcccgctggatcggctcgaggcatcgttaggaatcgccaaggtcgatcacggtggc
gcggtcgcggtgcagaatccggtgccgcgcgtgatcgtcagtcaacgacccgcgattctg
gtgcccatccagggcagtccggtgctgaagccggccgcggatgcggacaccccggtacag
cggatcatcaatacaagggcggtgattctgaccaccggcgagaaccaacccttttatctc
catctgctcgacggctgggtgaccgcccccacgctcgccgggccctgggtgcatgccgag
atcaccccggcgggtatcgacgccgttgccagccaactcgccgcgcgtggagaggcggac
ctgctcaacggcagtcccagcacaccgacggtcgatctgctggcggccggcatcccggac
gtctatgtcagccagacgccgaccgagctgatcgtcttccaggggcagccggatcttgtg
ccgatcgatggcaccgcgctgttgcgcgccaagaacacgagtgccgatgtgttcgtcgac
accgacgacaacagctattacgccttgatggccgggcgctggtatcgcgcccccgacctc
aacgggccctgggcctttgttgccagtacggacctgcccgtcgatttcaagcagatcccg
ccccagagcacggccggggtggtactttccacggtcgccggcacaccccaggcgcgcgag
gcggtcatcgccaatacgattccgcagaccgccaccattccccgcaaggccaacgacggc
cccgtgtttacggccaagttcgacggtccaccgacgattgggctcctccaggggacggac
ctggaatacgccgtcaacagcgagacgccgatcatccgggtcaacggcgagatgtactat
gcgctgcaggacggcgtctggttccaatcgccgtcattcgacggtccttgggagctctcc
accgcggtgccggacgccatctacgcgattccgcccagttcgccgctgcattacgtcacc
tacgtgcacatttacgacagcaccccggaggtgatctacgagggctatacgccgggctat
ctcggcaccgtgcagtccaccgacggcgtcgtggtctacggcaccggctacgactaccaa
ccctggatcggcgatgcctggtatgccgctccggagaccttcggcctggccgcgcagccg
gtctacaaccccgccgccggttacgccttcggcttcggtctcgggctcgccacggccgcg
atggcggagccctactggggcggcgcctattatcgaccctacgacatgggctatggctgc
tgcggcgtgaccagcgccaatgtctaccgccagtgggggaatacggtcgccgcgggcacg
cgcacctggtacgaccgcgcggacggcaccctgggcaccggcgcccgaggcgattacagc
aactggcgcaccggcaccagcggacgctatgccgccgggcgcagctacaacccctacacc
ggcgtcgcccaacgcggctatggacgcagcttcgacaccgcgggcggtgtcgacggcgga
gtggctcgcggcgagcgctacaacccggcaacgggcgtccgatcctacggctccaggatg
gcggcaagcggtcccgacggcgactccgtctcgcgtgatagcgtgcgcgcgagcggtccg
ttcggcggcaccgccgcggcgcaccagaccaccttcagcaacccgcgcaccggtgagaca
cgcaccctcgacaccgcccgtgtcggtaacaatctctatgccggtgcggacggcaacgtc
taccgcaataccggtaatgagtggcagcggcacgaagacggcggctggcaggatgccggc
gatgccggttgggccgatcgcgagcagcaagcgcgttctctcggtgacgaccgcctgaac
agcgggttcggtttcgacgacagattcggcggattcggtttcggcgaaggtgattttgac
aaccgattcggcggagggggattcggcggcgcaggtccgggcggtggtgccttcggcggt
cgattcggtggcggcttcggtgaccgattcggcggcggctttggcggtcgcttccatggt
cgacgatga
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