Thiocapsa bogorovii: LT988_06340
Help
Entry
LT988_06340 CDS
T07840
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
tbog
Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbog03400
]
LT988_06340
DNA repair and recombination proteins [BR:
tbog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
LT988_06340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
UHD17664
LinkDB
All DBs
Position
complement(1405054..1405602)
Genome browser
AA seq
182 aa
AA seq
DB search
MTDQLTPDQRSRLMARVVGKDTKPEWILRSALHRLGFRYRLGGGGLPGRPDLILPKYRAV
VFVHGCFWHHHADCKRATLPRTNAAFWKEKLERNVARDAEAVAVLEASGWKVIVVWECEL
YRDPVAVAFRVVSALTDGAAVPEDGGCDIGTLDPRRLLQVAEEKRRYRIGPKTLKGDVDQ
DG
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgacggatcagctcacccctgaccagcgttcgcggctgatggccagggtcgtcggcaag
gacaccaagcccgaatggatcctgcgctccgcactgcaccggctcggatttcggtatcgc
ctcggcgggggcggacttccgggtcgtccggacctgatcctgcccaagtatcgcgccgtc
gtcttcgttcacggctgcttctggcaccaccatgccgactgcaagcgcgcgaccttgccg
cgcaccaacgcggccttctggaaagagaagctcgagcgcaacgtcgcgcgcgacgccgag
gccgtcgccgtgctcgaggcctcgggttggaaggtcatcgtggtctgggagtgcgagctg
taccgcgatcctgttgcggtcgcctttcgcgtggtttcggcattgaccgacggagccgcc
gtgccggaggatggcggatgcgatatcgggacactcgatcctcggcggttactgcaagtc
gccgaagagaagcgacgctaccggatcggcccaaaaacacttaaaggcgatgtggatcaa
gacgggtga
DBGET
integrated database retrieval system
