Thiocapsa bogorovii: LT988_06980
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Entry
LT988_06980 CDS
T07840
Symbol
btuB
Name
(GenBank) TonB-dependent vitamin B12 receptor
KO
K16092
vitamin B12 transporter
Organism
tbog
Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tbog02000
]
LT988_06980 (btuB)
Transporters [BR:
tbog02000
]
Other transporters
Pores ion channels [TC:
1
]
LT988_06980 (btuB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl
Imm2
Motif
Other DBs
NCBI-ProteinID:
UHD17785
LinkDB
All DBs
Position
complement(1554081..1555931)
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AA seq
616 aa
AA seq
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MRIPVVAAALSLSFGLPLHADTQTVTLDPLVVTATRTPESEDQTLASVSVIDREEIERRQ
FRSVPDALRGLPGVSISGSGGAGQPSSLFLRGTNAGHVLVLIDGVKVGSATLGTAPLQDL
PIAQIERIEVVRGPRSSLYGSEAIGGVIQIFTRRGGGPLRPRFSVGAGSFDTASIAGGIS
GGGERGWFDVGANMEQTEGINACDGRAFPFAGCGVDEPDRDGYRNLGVSARAGYAFTDRA
KVDFSLLTSDNRTDFDGSIFSGNLSRSEQQVFGVEGTLRPLDPWTLILSAGRSQDKYRAF
YSDAFVSERFVDSFETERDNFGIQNDLALIPDQLFTLGLDYQVDRISGTVDYTDDSRSNT
GVYGQYLGSIGANELAASLRYDDYQQFGGQTTGNVAWGYLFEQGIRVSASYGTAFKAPTF
NDLYYPGFGNPDLSPEESASVELGLTGILPLGRWELSLYQTDIDDLIAFDAVTYAPANIA
SARIRGFEASGMLSIREWDLGASLTLLDPENRSNGPNQGNLLPRRPEQMVQLDLDRRFER
WSAGLSLYVAGRTFDDLANNERLDGYTLLGLRAEYAFTPAVRIQGRLENALDEDYQTAYL
FNQPGRAFYLTLRYEP
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcccagttgtggcggcggccttgtcgctgtcgttcggtctgccgcttcatgcg
gacacccagaccgtgacccttgatcccctcgtggtgacggcaacgcgcacgccggagtcc
gaagatcagaccctggcgtcggtcagcgtgatcgatcgcgaagagatcgagcgtcgtcag
tttcgctcggttccggatgcgttgcgcggcctgccgggcgtctccatttcgggcagcggc
ggggccggtcagccttcgtcgctcttcctgcgcgggaccaatgccggccatgtgctcgtc
ctgatcgatggcgtgaaggtgggttcggcgaccctcgggaccgcaccgctgcaggatcta
cccatcgctcagatcgagcgcatcgaggtcgtgcgtggcccgcgctcgagcctctacggc
tcggaggcgatcggcggcgtgatccagatcttcacccggcgcggtggcggtcccttacga
ccacgattcagcgtcggcgcggggagcttcgacacggcgagtatcgcaggcggcatctcc
ggcggcggggagcgtggctggttcgacgtcggcgccaacatggagcagaccgaagggatc
aacgcctgcgatggccgcgccttccccttcgccggctgcggcgtggacgagccggatcgc
gacggttaccgcaacctgggcgtgagtgcacgcgccggctatgcgttcaccgacagggcc
aaggtcgatttcagtcttctcacctccgacaatcgcaccgatttcgacggctccatcttc
tcgggcaacctctcacgctccgagcagcaagtgttcggcgtggaaggcaccttgcgtccg
ctcgatccctggaccctcatcctctcggccggtcggagtcaggacaagtatcgggcgttt
tattccgacgccttcgtgtccgagcgtttcgtcgacagcttcgagaccgagcgcgacaac
ttcggcatccagaacgatctcgccttgatcccggatcaactctttactttgggtctggac
taccaggtcgatcggatctcgggcaccgtggactacactgacgactcgcgaagcaacacg
ggtgtctacggccaatatctcggctccattggggcgaacgagcttgccgccagcctcaga
tacgacgactaccagcagttcggcggacagacgaccggcaacgtcgcttggggttatctg
ttcgagcaagggattcgcgtctctgcatcctacggtaccgccttcaaggcgccgaccttc
aacgacctctactatcccggcttcggcaacccggatttgtctcccgaagagtcggccagc
gtcgagctgggtttgaccggaatcctccctctcggtcgctgggaactgagtctctaccag
accgacatcgacgacctgatcgccttcgatgcggtcacctatgccccggccaacatcgcc
tcggcccgcatccgcggcttcgaggcgtccggcatgctgagtattcgggagtgggatctc
ggcgcgagtctcaccctgctggatcccgaaaaccggtcgaacgggccgaatcagggtaac
ctgctgcctaggcgccccgagcagatggtccagctcgatctggaccgccggttcgagcgt
tggtcggcgggcctgagcctctatgtcgccgggcgaacattcgacgacctggccaacaac
gagcgattggatggatataccctgttgggtctgcgcgccgagtatgccttcaccccggcg
gtacgcatccaggggcgactggagaatgcactcgacgaggattaccagaccgcttatctg
ttcaaccagcccgggagggcgttttacctgaccttgagatatgagccgtag
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