Thiocapsa bogorovii: LT988_08480
Help
Entry
LT988_08480 CDS
T07840
Name
(GenBank) mechanosensitive ion channel
KO
K05802
potassium-dependent mechanosensitive channel
Organism
tbog
Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tbog02000
]
LT988_08480
Transporters [BR:
tbog02000
]
Other transporters
Pores ion channels [TC:
1
]
LT988_08480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Dor1
Motif
Other DBs
NCBI-ProteinID:
UHD18056
LinkDB
All DBs
Position
1859040..1862477
Genome browser
AA seq
1145 aa
AA seq
DB search
MLPFLLVSSMMLAGDAPAAEPTPAGSIPTAPATSSDGLPSVDQIEAKIAEVAADTALDEA
GKAALTEQYRRALANLEATRTFDKQANDFAKALTTAPAETTAIRERLAQREQGASEPDEI
PKDLPKEEIARRLSIVLADATAQETRVGELDKAIERNAGRPAAIRARLSDVKTALGEIDT
ELNQPTSADADAASVEARQWALETRRASLWAETRMLEQDLLSQSAREALNRAKREEAVLE
WETLQARQRQLEELQNQRRRDEAEAAQRESERAKIAASDKHALVQEATRENAEITTSMGD
LARDLDALALEIETLEAERKRVEQDFKAAQERIEAAGLSKALGQVLVERRDEIPDQRRLR
GEIEDREEKIAEATLRQILYREEQRQLRDLDAYLDELTTRDPTAQAPEVREQLKEALEQR
RRLITQALSVEDDYIRQLGELNYAADQLIQTAERYDDYLAERLLWVRSTLPVGIETLVTL
PSAIGWLVAHEHWVEVTKVLTHAGVHSPLLWGLLLVVVVLFWKLSALRRAIRATAEPLRR
IRTDRLRYTGKAIGLSLLAALPIPLLLCLIGLPLSTSINATGFTRALGSALIAASVGLYY
LRAFRTLCITGGVADRHFRWSQETLQRLRREFDWFSIFIVPVALTAMVLYNDSDPAFSGS
LGRLAMIVTMVGFSVFFARLLSPAKGVVKPFLAASPNGWFNRLRLIWFPVIVGAPLGLAV
LALLGYVYTAGVLFESLVQQTWLALALIVLHQVIVRWLIVTRRRLALTAAVERASARRAQ
NEAERKETAQAPSELQVDEPEPNLAALDEQTRRLINASVFFTALLGVWLTWSDVLPALSM
LERIPLWYYEGMVDGVAQPVPVTAANLGLVLLILFVATAAAKNLPALLEILLLQTESVSA
GGRYAIKTLVSYGITVAAFLLAFSTLGLNWGQVQWLVAALGVGIGFGLQEIVANFISGII
ILFERPVRVGDIVTIGDTTGVVTNIQIRATTIRNWDRQELLVPNKEFITGRLLNWSLTDQ
QNRITIPIGIEYGSDTRKALSILAQIAKQHERVLDDPAPLISFEGFGDNALTIVLRCYLN
ALEGRIGVATELHQAIYDRFKEEGIGMAFPQRDVHLSLREPLDIRLDPAVRDAVRAASPV
RQGGS
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
ttgcttccgttcctcctggtttcctcgatgatgctcgcgggcgacgcgcccgcggccgag
ccgacgccggccgggtcgatcccgaccgcaccggcaaccagcagcgacggcttgccgtcg
gtcgaccaaatcgaggccaagatcgccgaggtggcggctgatacggcactcgacgaggcc
ggcaaggcggctttgaccgagcagtatcggcgggcactggcaaacctcgaggcgacccgg
accttcgataaacaggccaacgatttcgccaaggcgctgacgacggcacccgcggaaacc
acagcgatccgggaacgactggcgcaacgcgagcagggcgcgagcgagcccgacgagatt
ccgaaggatcttccgaaggaagagatcgcgcggcgcctgagcatcgtactcgccgacgcg
accgcacaggagacgcgagtcggcgagctcgacaaggcgatcgagcgcaacgcgggccga
cccgccgccatccgcgcacgcctgtcggatgtgaagacagcgctcggcgagatcgatacc
gaactgaaccaacccaccagcgccgacgcggacgccgcgtcggtcgaagcacgccaatgg
gcgctcgaaacccgtcgagcgtcgctctgggccgagacgcgtatgctcgagcaggacctg
ctgagtcagtccgcgcgcgaagcattgaaccgcgctaaacgagaggaagctgtcctggag
tgggagacccttcaagcccggcagcgccagctcgaggagctgcaaaaccagcgacgtcgc
gacgaggcggaggcggcgcagcgggaatccgagcgtgcaaagatcgcggcctcggacaag
catgccctggtgcaggaggcaacccgggagaacgccgaaatcacgacatccatgggcgat
ctggcccgcgatctcgatgccctcgcccttgagatcgagaccctcgaggccgaacgcaaa
cgggtagagcaggatttcaaggcggcgcaggaacgcatcgaggccgccggtctcagcaag
gcgctcggtcaggttctggtcgagcggcgcgacgagattcccgaccagcggaggctgcgc
ggggagatcgaagatcgcgaagagaagatcgccgaggccacacttcgacagatcctctac
cgcgaggagcaacgtcagctgcgcgatctcgatgcctatctcgacgagctcaccacgcgt
gatccaaccgcgcaggccccggaggtccgcgagcaactcaaggaggcactcgagcaaaga
cgccgcttgatcacacaggcactgagcgtcgaggacgactacatccgccagctcggcgag
ttgaactatgccgccgaccagctcattcaaaccgccgagcgttacgacgactatcttgcc
gagcggttgctgtgggtacgcagcaccctcccggtcggcatcgagaccctcgtcacgctg
ccctctgccatcggctggctcgtcgcgcacgagcattgggtcgaggtcacaaaggtactg
acgcacgcgggggtgcactcgccgctgctctggggtctattgctcgttgtcgtcgtcctg
ttctggaagctttcggcgctgcggcgcgcgatccgcgccacggccgaaccgctgcgcagg
atccgaacggatcgcctgcgctataccggcaaggctatcggcctgagccttttggcggca
ctccccataccgctcctgctgtgcctgatcggactgccgctgtcgacgtccatcaacgcc
accggcttcacgcgcgcgcttgggtcggccctgatcgccgcctccgtcggtctgtactat
ctgcgtgctttccgaacgctctgcatcaccggaggggtcgccgaccgacactttcgctgg
agccaagaaacccttcagcggctcagacgcgagtttgattggttcagcatcttcatcgta
ccggtcgccctgacggccatggtgctctacaacgacagcgatccggccttcagcggcagt
ctcggacgcctggcgatgatcgtgaccatggtgggattctccgtcttcttcgcgcgccta
ttgagccccgcgaagggtgtcgtgaaaccgttcctcgcggcgtccccgaacggttggttc
aaccgcttgcgtctcatttggtttccggtgatcgtcggcgcgccgctcgggttggcggtg
ctcgcgctgctgggctatgtctacacggccggcgtgctcttcgagtcgctggtccaacag
acctggcttgcgcttgcattgatcgtgctgcatcaggtcatcgtgcgatggctgatcgtc
acgcggcgacgcttggcgctgacggcagccgtcgagcgtgcgagcgcgcgccgtgcgcaa
aacgaggccgagcgtaaagagaccgctcaggcgccctcggagctgcaggtcgacgagccg
gagccgaatctcgccgcactcgacgagcaaacccgacgcctgatcaatgcctcggtgttc
ttcaccgcattgctgggggtgtggctgacctggtcggatgtcctgccggctctgtccatg
ctcgagcgcatcccgctgtggtattacgagggaatggtcgacggcgtcgcccaaccggtc
ccggtgacggcggccaacctcggcctggtgctgttgatcctcttcgttgcgacagctgcc
gccaagaacctccctgccctgttggaaatcctgctgcttcagaccgaatccgtctcggcg
ggcgggcgttatgcgatcaagaccctggtcagctacggcattacggtcgctgccttcctg
ctcgcgttcagcacgctcggactgaactgggggcaggtgcaatggctcgtcgcggcgctg
ggcgtcggtatcgggttcggccttcaggagatcgtggcgaacttcatcagcggcatcatc
atcctgttcgaacgcccggtgcgcgtcggcgacatcgttaccatcggcgatacgaccggc
gtggtcaccaacatccagatccgcgcaaccactatccgtaactgggacaggcaggaactc
ctggtacccaacaaggagtttattaccggccggttgttgaactggagtctgaccgatcaa
caaaaccgcatcacgatcccgatcggcatcgaatacggaagcgacacgcgcaaggcgctg
agcatcctcgcgcagatcgccaaacagcatgagcgggtactcgatgatcccgctcccttg
atcagcttcgaggggttcggcgacaacgccctgaccatcgtgctgcggtgctatctcaac
gcgctcgagggtcggatcggcgtcgccaccgagctacaccaagcgatctacgatcggttc
aaggaggaggggatcggtatggcgttcccgcaacgcgatgtccatctttcgctgcgcgag
cccttggatattcgtttggatcccgccgttcgcgacgcggttcgggcggcgtcaccggtc
cggcaaggcggatcttga
DBGET
integrated database retrieval system
