Thiocapsa bogorovii: LT988_08665
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Entry
LT988_08665 CDS
T07840
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00220
Arginine biosynthesis
tbog00240
Pyrimidine metabolism
tbog00250
Alanine, aspartate and glutamate metabolism
tbog01100
Metabolic pathways
tbog01110
Biosynthesis of secondary metabolites
tbog01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LT988_08665 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LT988_08665 (carB)
00220 Arginine biosynthesis
LT988_08665 (carB)
Enzymes [BR:
tbog01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LT988_08665 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_5
ATP-grasp_4
ATP-grasp_2
CoA_binding_2
Glyoxalase_5
Motif
Other DBs
NCBI-ProteinID:
UHD18091
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Position
complement(1903547..1906756)
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AA seq
1069 aa
AA seq
DB search
MPKRTDISSILIIGSGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPVTWRAVSAIIERERPDALLPTMGGQTALNCALDLVREGVLERFGVELIGASR
EAIDKAEDRDLFRKAMRKIGLDMPRSAIAHSLEEAIQVQASIGFPTIIRPSFTMGGSGGG
IAYNQEEFEEICRRGLDLSPTKELLIEESALGWKEFEMEVVRDRADNCIIICSIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRDASIAVLREIGVDTGGSNVQFAINPADGRMIIIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSIDYVVTKIP
RFAFEKFPQADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEIDRYGLEEIVDPREPDA
AKQVRHELRQTGAERIFYLADAFRLGMSLEEIHDLSKIDPWFLSQLEDLVHVEAQVRAGG
HEALSREHLRLLKRKGFSDRRIGHLVGTTEHEIRTLRHGQGLRPVFKRVDTCAAEFASST
AYLYSTYEEECEAEPSDRQKIMVLGGGPNRIGQGIEFDYCCVHAAFALRDDGYETIMVNC
NPETVSTDYDTSDRLYFEPLTLEDVLEIVAKEKPLGVVVQYGGHTPLKLARDLEAAGVPI
IGTSPDSIDLAEDRERFQQMIQELGIRQPPNATARSEAEAIERAARIGYPLVVRPSYVLG
GRAMEIVFDESELNRYMREAVRVSNESPVLLDRFLDDAIEVDIDAICDGKDVLIGGIMEH
IEQAGVHSGDSACSLPPYTLSPSIQDRMREQMAQMAHALKVVGLMNAQFAVKGEDVYILE
VNPRASRTVPFVSKAIGLPLAKVAARCMAGTTLAEQGIRRERMPKHYFVKEAVFPFIKFP
GVDTQLGPEMKSTGEVMGVGESFGEAYAKAQEGAGTLLPRLGGTALLSVRLADRARLIRV
ARDLVGFGFTLFGTHGTAQSLRDAGLDCIGVNKVAEGRPHVVDMIKNNDISFIVNTTEGS
QAIADSAAIRRAALQHKVSYTTTISGAEATCLALKQLDILSVNRLQDLA
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgtaccgacatctccagcatcctgatcatcggctccgggccgatcgtcatc
ggtcaggcgtgcgagttcgactactccggcgcgcaagcctgcaaagcgctgcgcgaagag
ggctaccgggtcatcctggtgaactccaaccccgcaaccatcatgaccgaccccgagatg
gcggacgccacctacatcgagccggtcacctggcgcgcggtttcggccatcatcgagcgt
gagcgcccggatgcactgctgccgacgatgggcggtcagaccgcgctgaactgcgcgctc
gatctggtgcgcgagggcgtgctcgagcgctttggcgtcgagctgatcggcgcctcgcgc
gaggcgatcgacaaggccgaggaccgcgacctcttccgcaaggcgatgcgcaagatcggg
ctggacatgccgcgctcggcgatcgcccatagcctggaggaggcgatccaggtccaggcc
tcgatcggctttccgaccatcatccgtccgtcctttacgatgggcggcagcggcggcggc
atcgcctacaaccaggaggaattcgaggagatctgccggcgcgggctggatctctccccg
accaaggagctcctgatcgaggagtcggcgctcggctggaaggagttcgagatggaggta
gtccgggaccgcgcggacaactgcatcattatctgctcgatcgagaacttcgacccgatg
ggggtgcacaccggcgactcgatcacggtcgcgccggcgcagaccctgacggacaaggaa
taccagatcatgcgcgacgcctcgatcgcggtgttgcgcgagatcggggtggataccggc
ggatcgaacgtgcagttcgcgatcaatccggccgacggccgcatgatcatcatcgagatg
aacccgcgcgtgtcgcgctcctcggcgctcgcctccaaggcgaccggttttccgatcgcc
aaggtcgcggccaagctggcggtgggctacacgctcgacgagttgcgcaacgagatcacg
ggaggtgccacgccggcctctttcgagcccagcatcgactacgtcgtcaccaagatcccg
cgcttcgccttcgagaagttcccgcaggccgacgcgcgtctgaccacccaaatgaaatcg
gtcggcgaggtgatggcgatcggccgcaccttccaagagtcgcttcaaaaggccctccgc
ggcctggagatcgaccgctacggtctagaggagatcgtcgatccgcgcgagccggatgcc
gccaagcaggttcgccacgagctgcgtcagaccggggctgagcggatcttctatctcgcc
gacgccttccgtctgggaatgagtctggaggagatccacgacctgtccaagatcgatcct
tggttcttgtctcaactggaggatctcgtgcatgtcgaggcacaggtgcgcgcgggtggt
cacgaggccctgagccgcgagcatctgcgtctgctcaagcgcaaggggttctcggatcgg
cggatcggtcacctcgtcggcacgaccgagcatgagatccggacactgcggcacgggcag
ggcttgcggccggtgttcaagcgcgtggacacctgcgcggccgagtttgcgtcgagcacc
gcctatctctactccacctacgaggaggagtgcgaggccgagccgagcgatcgccaaaag
atcatggtcctcggcggcggtccgaaccgcatcggccagggcatcgagttcgactactgc
tgtgtccacgccgccttcgcactgcgcgacgacggttacgagaccatcatggtcaactgc
aatcccgagaccgtctcgaccgattacgacacctccgaccggctctatttcgagccgctg
accctcgaggacgtgctcgagatcgtcgccaaggagaagccgctcggcgtcgtggtccag
tacggcggccatacccccttgaagctcgcgcgcgatctggaagctgccggcgtgcccatc
atcggcaccagtccggacagcatcgatctggccgaagatcgcgagcgttttcagcagatg
atccaggagctggggattcgacagccgccgaatgcgaccgcgcggagcgaggccgaggcg
atcgaacgggccgcccggatcggctatccgctggtcgtgcgtccctcctatgttctgggc
ggtcgggcgatggagatcgtcttcgacgagtcggagctgaaccgctacatgcgcgaggcg
gtgcgggtctccaacgagtcccccgtcctgctcgatcggttcctcgacgatgccatcgag
gtcgacatcgacgccatttgcgacggcaaggacgtgctgatcggcggcatcatggagcat
atcgagcaggccggcgtgcactcgggcgattcggcctgctcgctgccgccctacaccctg
tctccgtcgattcaggaccgcatgcgcgagcagatggcgcagatggcgcatgccctcaag
gtcgtcggcctgatgaatgcgcagttcgccgtcaagggcgaggatgtctacatcctcgag
gtcaatccgcgggcctcgcgaaccgttcccttcgtctccaaggccatcggcctcccgctc
gcgaaggtggccgcgcgctgcatggccggcacgacactcgccgagcagggcatccgccgc
gagcggatgcccaagcactatttcgtcaaggaggcggtcttccccttcatcaagttcccg
ggcgtggatacccagctcggtccggagatgaagtcgaccggcgaggtcatgggtgtcggc
gagtccttcggggaggcctatgccaaggcgcaagagggggcggggacactcctcccgcgg
ctcggcggaacagcgctcttgagcgttcgcctggccgatcgcgcgcgcctgatccgagtc
gctcgcgacctggtcggcttcggcttcacgcttttcggcacccacggtacggcacaatcg
ctgcgtgacgccggtctggactgtatcggcgtcaacaaggtcgccgaggggcgtccgcat
gtcgtcgacatgatcaagaacaacgacatcagcttcatcgtcaacacgaccgaaggctct
caagccatcgccgattccgcggcgatccgccgcgccgcgctccaacacaaggtcagctat
acgacgaccatttcgggtgcggaggcgacctgtttggcgctgaaacagctggacattctg
agcgtcaatcggttacaagatctcgcgtga
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