Thiocapsa bogorovii: LT988_08920
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Entry
LT988_08920 CDS
T07840
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00900
Terpenoid backbone biosynthesis
tbog01100
Metabolic pathways
tbog01110
Biosynthesis of secondary metabolites
Module
tbog_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LT988_08920
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tbog01006
]
LT988_08920
Enzymes [BR:
tbog01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LT988_08920
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LT988_08920
2.5.1.29 geranylgeranyl diphosphate synthase
LT988_08920
Prenyltransferases [BR:
tbog01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LT988_08920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
UHD18138
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All DBs
Position
complement(1959517..1960383)
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AA seq
288 aa
AA seq
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MDPTTRIEQALAAALESVTTSACPPRLAEAVRHAVFPGGARVRPRLCLAVAAACGSRDVE
AADAAGASIELLHCASLVHDDLPCFDDSPLRRGLPSVHRAYGEPLAVLAGDALIVLAFEN
LARVLGNSPERLAPLLMTVSRAVGMPSGIVAGQAWECEPKVSVADYHRAKTGALFAAATA
AGAQVAGADADAWRVVGDKIGEAYQVADDLRDVAASAQEVGKPVGRDAVLNRPSAAGELG
VDGAVALLRGLVKGAIDAIPPCPGSAQLAEVLMSESRHIMPKGLADRA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaccacgcgaatcgagcaagcactggcggcagccttggagtcggtgacgacg
tcggcctgcccgcccaggcttgccgaggcggttcgccatgccgtcttcccgggcggagcg
cgcgtgcgaccgcggctctgtttggccgtcgctgcggcgtgcggcagccgcgatgtcgag
gctgccgatgccgccggcgcctccatcgagctgctccactgcgcgtccctggtccatgac
gatctgccttgtttcgacgactccccgctgcgtcgaggtctgccctcggtccatcgggcc
tacggcgagccgctcgccgtgttggccggcgatgccctgatcgtcctcgccttcgaaaat
ttggcccgcgtcttgggcaacagcccggagcgtctggcgccactcctgatgaccgtcagc
cgagctgtcgggatgccgtccggcatcgtcgccggtcaggcttgggagtgtgagcccaag
gtctccgtcgcagactatcaccgggcgaagacaggcgcgctctttgccgctgcaaccgcc
gccggtgctcaagtggccggggccgatgccgatgcctggcgtgtggtcggcgacaagatc
ggcgaagcctaccaggtcgcggatgatctgcgcgacgtcgccgccagtgcccaagaggtc
ggcaagccggtcgggcgcgatgcggtactcaatcgcccgagcgctgcaggcgagctcggg
gtggacggcgcggtcgctctgcttcgcggtctggtcaagggcgccatcgatgcgatcccg
ccatgtccgggctccgcgcaacttgcagaggtcctgatgtcggaatcgcgacatattatg
ccgaagggcctcgccgatcgcgcttaa
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