Thiocapsa bogorovii: LT988_09585
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Entry
LT988_09585 CDS
T07840
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LT988_09585 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tbog03019
]
LT988_09585 (recQ)
03400 DNA repair and recombination proteins [BR:
tbog03400
]
LT988_09585 (recQ)
Enzymes [BR:
tbog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LT988_09585 (recQ)
Messenger RNA biogenesis [BR:
tbog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LT988_09585 (recQ)
DNA repair and recombination proteins [BR:
tbog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LT988_09585 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
RecQ_Zn_bind
DEAD
HTH_40
HRDC
Helicase_C
GerE
HTH_29
HTH_24
BTRD1
ResIII
Motif
Other DBs
NCBI-ProteinID:
UHD18257
LinkDB
All DBs
Position
complement(2110630..2112834)
Genome browser
AA seq
734 aa
AA seq
DB search
MNETPIQVLNRVFGYDRFRGAQAEIIDRVIGGGDALVLMPTGGGKSLCYQIPALLRPGVG
VVVSPLIALMQDQVDALRQLGVRAAFLNSSLTVQEARAVEESMISGDLDLVYVAPERLLT
ERFLALLDRVQVALFAIDEAHCVSQWGHDFRPEYIQLHLLHERWPQIPRVALTATADAPT
RAEILTRLGLEQAGQFVSSFDRPNIRYRIVEKANPRQQLIAFLRNEHPGDAGIVYCLSRR
KVEETAAYLATQGVTALPYHAGLPAETRRTHQARFLREEGVVIVATIAFGMGIDKPDVRF
VAHLDLPKSLEAYYQETGRAGRDGQAADAWMTYGLGDVVMLRRMIEESEAEERFKRVEMQ
KLDSMLGFCETTECRRQVLLNYFGEPLPKPCGNCDTCLEPVATWDGTQAAQKALSCIYRT
GQRFGSSYLVDVLLGKNNERIRRFGHDQVTTFGIGQELSADQWKSVYRQLVAAGFIAVDI
EGHGALRLTEQARPLLRGERRIRLRQDPDRKKSTGAGRKPAAELPSDPEALGLWEALRDY
RRQLALEQDVPAYVIFGDATLREILTYRPRDRDELSRISGVGQAKLERFGDGFLKLLATH
AAKHGRPSIVPKLPVARPASVGARARESGLTDTIRETLELFRAGQGVEAIAEQRALKPST
VYTHLERCIEEGQVAVKDVVRLDHETVRAIEFAIERLPESALMSLKPIYDAFEGRYDYGL
LRCVRAGMGGSAGD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagacgccgattcaggtcctcaaccgcgtcttcggctacgaccgttttcgcggc
gcccaggccgagatcatcgaccgggtgattggcggcggagacgccctggtcctgatgccg
acgggtggaggcaagtcgctctgttatcagatcccggcgctcctgcggcccggggtcggc
gtggtggtctcgccgctgatcgcattgatgcaggatcaggtcgatgcgctgcggcaactc
ggggtgcgagccgccttcctgaactcgtcgttgacagtgcaggaggctcgagcggtcgag
gagtcgatgatctcgggcgatctggacctggtctacgtcgccccggagcgccttctgacc
gagcgtttccttgccttgctggatcgcgtccaagttgccctgttcgcgatcgacgaggcc
cactgcgtctctcagtggggccatgatttccgccccgaatacatccagctccacctgctg
cacgagcgttggccccaaatcccgcgcgtcgcactcacggcgaccgccgatgcaccgacc
cgtgccgagatcctcacccggttgggtctggaacaggccgggcagttcgtgtccagcttc
gaccgaccgaacatccgctatcgcatcgtcgagaaggccaacccgcgccaacagctcatc
gccttcctgcgcaacgagcatcccggcgatgcaggcatcgtctactgtctgtcgcgacgc
aaggtcgaagagacggcggcctatcttgcgacgcagggcgtgaccgcgctgccctatcac
gccgggcttccggccgagactcgtcgcacgcaccaagcccggttcctgcgcgaggaaggt
gtggtcatcgtcgcgaccatcgccttcgggatggggatcgacaaaccggacgtgcgtttt
gtcgctcatctcgacctacccaagagtctggaggcctactatcaggagaccgggcgcgcc
gggcgcgacggccaagcggcggatgcctggatgacctatggtctgggcgatgtggtgatg
ctgcgtcgcatgatcgaagagtccgaggccgaggagcgcttcaagcgggtggagatgcag
aagctcgacagcatgctcggtttctgcgaaacgaccgagtgccggcgccaggttctgctc
aactatttcggcgagcccctacccaagccctgcggcaactgcgacacctgcctggagccc
gtcgccacctgggacggaacgcaggcggcgcagaaggcgctctcctgcatctatcgcacc
ggccaacgcttcggcagcagctatctggtggatgttctgctcggcaagaacaacgagcgc
attcgccgcttcgggcatgaccaggtcacgaccttcggcatcggccaagagctgtccgcg
gatcaatggaagtcggtctatcgccagctcgtcgcggcgggattcatcgccgtcgatatc
gagggtcatggcgcccttcggctgaccgagcaggcccggcctttgctccgtggtgagcgt
cggatccgattgcgccaagaccccgaccgcaaaaaatcgaccggggcaggccgcaaaccc
gccgcggagttgccgagcgatccggaggcgctcggcttgtgggaagcgctacgcgactac
cggcgtcaactcgccctggagcaggatgtccctgcctacgtcatcttcggcgatgccacc
ctgcgcgagatcctgacctaccgcccgcgcgatcgcgacgagctgagccgaatcagcggt
gtcggtcaggccaagctcgagcgcttcggtgatggctttctgaagctgctcgccacgcac
gcggccaagcacggccgaccctcgatagtaccgaagctgccggtcgcgaggcccgcctcg
gtcggtgcgcgcgcccgcgagtccggattgaccgacaccattcgagaaaccctcgagctc
tttcgcgcaggccaaggagtcgaggcgatcgccgagcagcgtgccttgaagcccagcacg
gtctacacgcacttggagcggtgcatcgaggaagggcaagtcgccgtgaaggacgttgtg
cgcctcgatcatgagaccgtccgggcgatcgaattcgccatcgagcgactgcccgagagc
gcgctcatgagcctcaaaccgatctacgacgccttcgaaggccgctacgattacggcctg
ctgcgatgcgtgcgagccgggatggggggctcggccggggattga
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