KEGG   Thiocapsa bogorovii: LT988_09900
Entry
LT988_09900       CDS       T07840                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tbog  Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:tbog00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tbog02048]
    LT988_09900
Enzymes [BR:tbog01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LT988_09900
Prokaryotic defense system [BR:tbog02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LT988_09900
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1RH-like_C T1R_D3-like ResIII
Other DBs
NCBI-ProteinID: UHD18317
LinkDB
Position
2192384..2195776
AA seq 1130 aa
MAITDINSEDRLVQETFADHLHRVLGWDSLYAWNQETFGPDGTLGRTDTKEVVLTRDLHA
AIAKLNPELPAKAVEDAIAQLTRQDFTRSTLQHNQGFYRYIRDGVPVSYRDAKGQMRQGF
ARVIDFRRPENNRFLCVRELKITGLRTPNYNRRADLVCFVNGLPLVFIELKAVYKNIRAG
FDGNLRDYLDEHVIAHAFHHNAFLIVSNGHRARYGSITSQWEHFAEWKRQDERDAGSLEA
EVLLNGLLAKERLLDLVENFILFDASKPGAVRKIVARNHQILGVNLAVDSVVRQEVLKGE
FPRGKRLRSRVIELPLESQRFLKAAEEPSPYIPKGPIELIERAHPDLGRLGVFWHTQGSG
KSYSMAFFTEKVRRIVPGNFTFVLMTDRNDLDSQIYKTFVGCGVADDRTPRAGSGKELEQ
LLRENHRYVFSLIHKFNQAVKFDEPYSKRDDIIVISDEAHRTQAGWLARNMRLALPNAAF
IGFTGTPLFKHDELTKRIFGGYISCYDFKRSEEDGATVKLVYENRGEKLGIARLDLNDRI
ADKIDEADLDPDQEALLEKLLGKDYEIITADDRLDKIAEDFVEHCATRWESGKSMLVCID
KITCARVFQRILPRWTAKAESVHGKAEAKHVEIASETDPYVRERLRAELDRLRSQARWLD
KTLIQIVISEAQNEVTDFKRWGFDIIPHRALLKQGFETTDGKRVDVETAFKDPEHPFRVA
IVCAMWLTGFDVESLSTLYIDKPMKAHTLMQAIARANRCYPGKDFGLIVDYNGMLKSLRE
ALAQYALGDDSGGEEEIIAPIEERVQALLEAIEATEAHVRALGAEMTALLGTHGFARIKG
IADAVDAVYTSDESKRRFEILARQVFVRFRALLMEPMAFTYAERHDNIEAIYKKLTERRD
TADVTELLKELHRIVNQAIRADAPGDDQTVGLTYDLSRIDLEKLREEFAKKVNHKATALQ
DIREIVEQKLAEMLRHNPKRMDYYKRYQQIIADYNREKDRVTIEDTFTELTDLIEGLDAE
QRRAAEEGLSEDELALFDLLQKETLGKAEREQVKQASQSLLASLRELLSPMERWTEKEQT
QAEVEIFILDRLYTELPSPPFTDDDKQEMAAVVYRHVWQQSVSGALGMAA
NT seq 3393 nt   +upstreamnt  +downstreamnt
atggccatcacggatatcaacagcgaagaccgcttggtccaggagaccttcgcggatcat
ctgcatcgggtcctggggtgggacagcctctacgcctggaaccaggagaccttcggaccc
gacggcacactcgggcgcacggacaccaaggaggtcgtgctgacccgcgatctgcacgcc
gccatcgccaagctcaacccggagctgcccgcaaaggccgtggaggacgccatcgcccag
ctgacccgccaggacttcacccgctcgacgcttcaacacaatcaggggttctaccgctac
atccgcgatggggtgccggtcagctatcgggatgccaaggggcagatgcgccagggcttt
gcccgggtcatcgacttccgccggcccgagaacaaccgcttcctctgcgtgcgcgagctg
aagatcaccgggctgcgcacgcccaactacaatcgccgcgccgatctggtctgcttcgtc
aacggcttgccgctggtcttcatcgagctgaaggcggtctacaaaaacatccgcgccggc
ttcgacgggaatctgcgcgactatctggacgagcatgtcatcgcccatgccttccatcac
aacgccttcctgatcgtcagcaacggccaccgggcgcgctatggctccatcaccagccag
tgggagcattttgcggagtggaagcgccaggacgagcgcgacgcgggcagcctggaggcc
gaggtgctgctgaacggcctgctcgccaaggagcgactactcgatctcgtcgagaacttc
atcctcttcgatgccagcaagccgggcgcggttcgcaagatcgtcgcgcgcaaccatcag
atcctgggcgtcaatctcgccgtggattcggtcgttcgacaagaggtgttgaaaggcgag
tttccgcgcggcaagcgtctgcgcagccgggtcatcgagctgccgctcgaatcccagcgg
tttttgaaggcggccgaggagcccagtccctacatccccaaaggaccgatcgagctgatc
gagcgtgcccacccggacctcggcaggctcggcgtcttctggcatacgcagggcagcggc
aagtcctactccatggccttcttcaccgagaaggtgcgccggatcgtgccgggcaacttc
actttcgtcctcatgaccgatcgcaacgatctggacagtcagatctacaagaccttcgtc
ggctgcggggtcgcggacgaccggacaccgcgcgccgggtccgggaaggagctggagcag
ctgctcagggagaaccatcgctacgtcttcagcctgatccacaagttcaaccaggccgtg
aagttcgacgaaccctacagcaaacgcgacgacatcatcgtgatctcggacgaagcgcat
cgcactcaagcgggctggctcgcacgcaacatgcgcctggccttaccgaatgctgccttt
atcggcttcaccggaacaccgctgttcaagcacgacgagctgaccaagcgcatcttcggc
ggctatatctcgtgctacgacttcaagcgctccgaggaagacggggccacggtcaagctg
gtgtacgagaatcgcggcgagaagctaggcatcgcccggctcgatctgaacgaccgcatc
gccgacaagatcgatgaggccgatttggaccccgatcaggaggcgttgctggagaaactg
ctcggcaaagactacgagatcatcacggccgacgatcggctggacaagatcgccgaggac
ttcgtcgagcattgcgcgacccgctgggaatccggcaagtcgatgctggtgtgtatcgac
aagatcacctgtgcccgtgtctttcagcgcattctgccgcgctggacggccaaggccgaa
tccgtgcacggcaaggccgaggccaagcacgtcgaaatcgcctccgagacggatccgtat
gtccgcgagcgcctgagggcggagttggatcggctgcgcagccaggcccgatggctggac
aagacccttatccagatcgtcatcagcgaggcgcagaacgaggtcaccgacttcaagagg
tggggcttcgacatcatcccgcatcgggcactgctgaagcagggattcgagacgacggac
ggcaagcgggtggatgtggagaccgctttcaaggacccggagcatcccttccgtgtcgcc
atcgtctgcgcaatgtggctgaccggattcgatgtggagagcctgtccacgctctacatc
gacaagcccatgaaggcgcacaccctgatgcaggccattgcacgcgccaaccgctgctat
ccgggcaaggacttcggtctgatcgtcgactacaacggcatgctcaagagcctgcgcgag
gcgctcgcccagtatgcactcggtgatgacagcggaggtgaagaggagatcatcgcaccc
atcgaggaacgggtgcaggcgctgctcgaagccatcgaggcgaccgaggcccatgttcgt
gccctgggggcggagatgacggccctgctcggcacacacggattcgctcgcatcaagggt
attgcggatgccgtggacgccgtctacacgagcgatgaatccaagcggcgtttcgagatc
ctggcccgtcaggtcttcgtccgcttccgggcacttctgatggagccgatggccttcacc
tatgccgagcgacacgacaacatcgaagccatctacaagaagctcaccgagcggcgcgac
accgcggacgtcaccgagcttctgaaggagctgcaccgcattgtgaatcaggccatccgc
gccgacgcaccgggggacgaccaaaccgtggggctgacctacgatctcagccggatcgac
ctggagaagctccgcgaagagttcgcgaagaaggtcaaccataaggcgacggcactccag
gacatccgcgaaatcgtcgagcaaaagctcgccgagatgcttaggcacaatccgaaacgg
atggattattacaagcgttaccagcagatcatcgccgactacaaccgcgaaaaggaccgg
gtcacgatcgaggacaccttcaccgagctgacggacctgattgagggtcttgatgccgag
cagagacgcgctgccgaggagggtctcagcgaagatgagctcgcgctcttcgacctgctg
caaaaggagacgctcggcaaggcggaacgcgaacaggtcaagcaggcgagtcagtccctg
ttggcgtcactgcgcgagctgctgtcgcccatggagcgatggacagaaaaggagcagacc
caagccgaagtcgaaatcttcatcctcgatcggctctacactgagctgccgtcgccaccc
ttcacggacgacgataagcaagaaatggccgcggtcgtctatcgccacgtctggcagcag
tcggtgagcggcgcactcggaatggcggcttga

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