Thiocapsa bogorovii: LT988_09965
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Entry
LT988_09965 CDS
T07840
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase (quinone) flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00020
Citrate cycle (TCA cycle)
tbog00190
Oxidative phosphorylation
tbog00650
Butanoate metabolism
tbog00720
Other carbon fixation pathways
tbog01100
Metabolic pathways
tbog01110
Biosynthesis of secondary metabolites
tbog01120
Microbial metabolism in diverse environments
tbog01200
Carbon metabolism
Module
tbog_M00009
Citrate cycle (TCA cycle, Krebs cycle)
tbog_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
tbog_M00149
Succinate dehydrogenase, prokaryotes
tbog_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LT988_09965 (sdhA)
00650 Butanoate metabolism
LT988_09965 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LT988_09965 (sdhA)
00720 Other carbon fixation pathways
LT988_09965 (sdhA)
Enzymes [BR:
tbog01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LT988_09965 (sdhA)
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Paralog
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
Motif
Other DBs
NCBI-ProteinID:
UHD18327
LinkDB
All DBs
Position
complement(2206628..2208517)
Genome browser
AA seq
629 aa
AA seq
DB search
MSKPNVIVIGGGLGGLWATLRIAHAGFPVELFSLFEVKRSHSVCAQGGINAVLDSKGQHD
SIRQHIIDTVKGGEYLANQPPVKAMCEDAPGLIRTFERMGVTFSRTSEGLLDQRLFGGVK
NKRTCFAGASTGQQLLYGVDQQVRRLESEDKVVKHEWWEFLSLLLDADGVCRGIVAMDLK
SLEVRAFAADAIVVASGGMGQLYAPKSTTSTNSTGAAASRCYRQGAWMANAEFFQFHPTA
MMGHDKNRLMSEAARGEGGRIWVPKTPGDRRPPKTIPESERFYFLEEFFPAYGNTVARDE
AARAIWTVTRQMGLGIGGDGGDRVYLDLTHLDAAFIGARLGAILEIYRKFAGVDPMTEPM
EIFPAAHYGMGGLWVDFERSADGGIQPDSPRNHATNIPGLYACGECDYAYHGANRLGANS
LLSASYSGRIAGESVVSYLKGLASDGASLAPEIPQAEVARQQAINADLMRADGADTPYLI
QKELGALMTAKVGVVRSNPELESAVGELQVLRDRLRNARLGESSTWSNQSLAFARQLGDM
IELAGVVARGALARDECRGAHYKPAFRIPIPEGKFAGDPEFETYRARWHANNAQWLKTTI
AEHTEDGPRLSYQEVDLSVYPPTEPRDYR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccgaacgtcatcgtcatcggcggcggcctgggcgggctctgggcgaccttg
cggatcgcccatgccggctttccggtcgagctcttctcgctcttcgaggtcaagcgcagc
cactcggtctgtgcgcagggcggtatcaatgccgtgctcgacagcaaggggcagcacgac
tcgatccgtcagcacatcatcgacaccgtcaagggcggcgagtatctggcgaatcagcca
ccggtgaaggccatgtgcgaggatgcccccggcctgatccgcaccttcgagcgcatgggc
gtgaccttctcgcgaacgtccgagggactgctcgatcagcgtctcttcggcggcgtaaag
aacaagcggacctgctttgcgggtgccagcacggggcaacagctcctctacggcgtcgac
cagcaggtccggcgactcgagtccgaggacaaggtcgtcaagcacgagtggtgggagttt
ctgtccctgctgctggatgccgacggcgtctgtcgcggcatcgtggcgatggatctgaaa
agtttggaggtgcgagccttcgcggccgatgcgatcgtggtcgcgagcggcggcatgggc
cagctctatgcgcccaagagcacgacgtcgacgaactcgaccggcgctgcggcgagccgc
tgctaccgacagggtgcctggatggccaacgccgagttcttccagttccatcctaccgcc
atgatggggcacgacaagaatcgcctcatgagcgaggcggcgcgcggggagggcgggcgc
atctgggtgccgaagacgcccggcgaccggcgacctcccaagaccatcccggagtccgag
cgcttctattttctggaggagttcttcccggcctacggcaacacggtggcccgcgacgag
gcggcgcgcgccatctggaccgtgacccgacagatggggctgggcatcggcggtgacggc
ggtgaccgggtctatctcgatctcacgcacctggatgcggcattcatcggcgcgcgcctg
ggcgccatcctggagatctatcgcaagttcgccggtgtcgaccccatgaccgagccgatg
gagatctttccggcggcccattacgggatgggcggcctttgggtcgatttcgagcgctcg
gccgacggcggcattcaacccgacagcccacgcaatcacgccaccaacatccccggactc
tatgcctgcggcgagtgcgactacgcctatcacggggccaaccgactgggtgctaactcg
ctcctgtcggcgagctactcgggacgcatcgccggagagtcggtggtgagctatctcaag
gggctcgcctccgatggcgcgtctctggctccggagatcccgcaggccgaggtcgcgcgc
cagcaggcgatcaacgcggatctcatgagggccgatggagcggacacgccgtatctgatt
cagaaggagctgggtgcactgatgacggccaaggtgggtgtggtgcgctcgaacccggag
ctggaatccgccgtcggcgagcttcaggtgctacgggaccgcttgcgcaacgcccggctc
ggcgagtcgagcacctggtcgaatcagagtctggccttcgcgcgtcaactcggcgacatg
atcgagctggccggagtcgtggcccggggcgcactggcccgcgacgagtgtcgcggtgcc
cattacaaacccgcgtttcggatcccgattccggaggggaagttcgcaggcgaccccgag
ttcgagacgtatcgcgcgcgctggcacgcgaacaacgcccagtggctgaagacgaccatc
gccgagcacaccgaggacgggcctcggctcagctaccaggaggtggatttgagcgtctat
ccgccgaccgagccgagggactaccgatga
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