Thiocapsa bogorovii: LT988_10310
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Entry
LT988_10310 CDS
T07840
Name
(GenBank) DNA photolyase FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tbog
Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbog03400
]
LT988_10310
Enzymes [BR:
tbog01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LT988_10310
DNA repair and recombination proteins [BR:
tbog03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LT988_10310
Prokaryotic type
LT988_10310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
UHD18393
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All DBs
Position
complement(2277904..2279166)
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AA seq
420 aa
AA seq
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MRRAGCPGHAPLADAPTRSVGLARLASFVPHAANYARERNRAVPPHDRVSRLSPYLRHRL
ILEREAVAAVLDAHPRESVDTFVSEVLWRTYWKGWLELRPHVWDRYLDQLRRDRDGLAGA
SSIRYAEAIAGRSGMACFDAWARELIETGYLHNHARMWFASIWIFTLRLPWTLGAAFFLR
HLLDGDPASNTLSWRWVAGLHTRGKHYLARAENIARYTDGRFDPKGELDEQAPPLTEPPL
DLKPRLLPASVELETDLPSGLLLTPEDLAPEVSQLSMRRFQGVAGGWDETLGKDLDFAPP
VVDFSRGAIGDALSRAEAHFAVLSHALDETDWLAATEAWARDLAVRRVVTLETPVGRWRE
RLEQLDARLANHGIALVRSRRTWDSSLWPGATRGFFPFREHARRQAHLGGLRRTEQPQPG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgagctggttgtcccggccatgccccgctggccgacgccccgactcggtcggtc
ggccttgcgcgtttggcgtcgtttgtcccgcatgccgcgaactacgcccgcgagcgcaat
cgggccgtcccgcctcacgatcgggtctcgcggctctcgccttacctgcggcaccgtctg
atcctggagcgcgaggcggtcgccgcggttctggatgcccatccccgggagtcggtcgac
accttcgtttccgaggtgctgtggcggacttattggaaaggctggctcgagcttcgcccg
cacgtctgggatcgttatctcgaccagctccggcgcgaccgcgacggactcgcgggggcg
tcgtcgatccgctatgccgaggcgatcgccggccggagtgggatggcctgcttcgatgcc
tgggcgcgggagctcatcgagacgggttacctgcacaaccacgcccgaatgtggttcgcg
agtatctggatcttcaccctacgtctgccctggacgctcggtgccgccttcttcctgcgt
cacctcctggacggtgatccagcctccaataccctctcttggcgctgggtcgcggggttg
cacacgcggggcaagcactacctggcccgtgcggagaacatcgcccgctacaccgatggg
cgcttcgaccccaaaggtgagctcgacgagcaggccccgcccctgaccgaaccgccgctg
gacctcaaaccccgtttgctcccggcgtcggtcgagttggagacggaccttccgagcggg
ctgcttctgacgccggaggatctcgccccggaggtctcgcaactgtcgatgcggaggttt
caaggcgtcgccggaggctgggatgagacgctcgggaaggacctcgacttcgctcctccg
gtcgtcgatttttcgcgcggcgcgattggcgatgccctctcacgagccgaggcgcatttc
gcggtgctgtcacacgcactggacgagaccgattggctggccgcgaccgaggcatgggcg
cgcgacctcgcagtgcgccgagtcgtcacgctcgaaacaccggtcggccgatggcgggag
cggctcgagcagctcgacgcgcgactcgccaaccacggcatcgcgctcgtccgatctcgc
cggacctgggacagcagtctgtggcccggtgccacccgcggattcttccccttccgcgag
cacgcccgtcgccaagcccatctcggtggtctcaggcgcaccgagcaacctcaacccgga
tga
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