Thiocapsa bogorovii: LT988_10630
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Entry
LT988_10630 CDS
T07840
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00550
Peptidoglycan biosynthesis
tbog01100
Metabolic pathways
tbog01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LT988_10630 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LT988_10630 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tbog01011
]
LT988_10630 (mrdA)
Enzymes [BR:
tbog01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LT988_10630 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
tbog01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LT988_10630 (mrdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UHD18450
LinkDB
All DBs
Position
complement(2347610..2349484)
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AA seq
624 aa
AA seq
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MLEANLEDRKRESRLIAIRAWIAAALVIAALGLVVVRLMHLQVDQHDHFSVLSRDNRVKV
QPLPPARGLVYDANGVLLADNHPSFSLEITIEKVDDLNATIEALSRVIPIDARDRARFER
QKRQRMRFQGVPIRLNLTPAEVARFAVDAHRFAGVDIRAELVRTYPLGEHTAHVLGYVGR
INEQELARIDKSNYAGSHFIGKSGLEKAHEALLHGRVGYQQVEVNARGRVIRTLESQPPV
SGKDLHLYLDIGLQQAAKEALGEERGAVVALDPRNGGILALVSNPSFDPNLFVEGISQTD
YQALLRSPDKPLFNRAVRGQYPPGSTIKQFVALAGLAEGVTTSRRATYCPGAFSLPGHSH
RFRCWRRGGHGALSLEQALVQSCDVYFYDLANRLGIDRLSGFLSDFGFGALTGIDVAGEL
GGLMPTRDWKRRVRKQAWYPGETLIVGIGQGSFLATPLQLAVATAAVANHGKVIRPQVAR
AAQAPGASAAEQLPMVSHTIDLADEHQWDLIIDAMAKVVESGTARRIRSTEYRIAGKTGT
SQVFSLGQNQRYNAATLPKHLKDHALFVAFAPVEDPRIALAVIVENGGGGGATAAPVARR
IMDAYLGVANEPSEPSDAGGGRGD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagccaatctcgaagaccgtaaacgcgagagccgcctgatcgcgatccgtgca
tggatcgcagcggccctggtgatcgccgcgcttggactcgtcgtggtgcgactgatgcac
ctccaggtcgatcagcacgaccatttctcggtgctgtcccgcgacaaccgggtcaaggtc
cagcccttgccgccggcacgtggactcgtctacgacgcgaacggggtcttgctcgcggac
aatcacccgtcgttctcgttggagatcacgatcgagaaggtggatgatctgaatgccact
atcgaggcgctgtcccgagtcatcccgatcgacgcccgggatcgtgcccgcttcgagcgc
caaaagcgacagcggatgcgttttcagggggtgccgatccggctgaatctcacgccggcc
gaggttgcgcgattcgcggtcgacgcgcatcgtttcgccggtgtcgatatccgtgcggag
ctggtgcgcacctatccgctcggcgagcacaccgcccacgtgctcggttatgtcgggcgg
atcaacgagcaggagctcgcccggatcgacaagagcaattacgccgggagccacttcatc
ggcaagagtggtctggagaaggcgcatgaggcactgctgcacggtcgggtcggctaccag
caggtggaggtcaacgcccgcggccgggtgatccgcacactcgagagtcagccgcccgta
tcggggaaggatctccatctgtacctggacatcggtctgcagcaagcggcgaaggaagcg
ctcggcgaggagcgcggtgcggtggtcgccctggatccccgcaacggcggcatcttggcc
ctcgtcagtaatccgagctttgaccccaatctgttcgtggaagggatcagtcagaccgat
tatcaagccttgctgagatcgccggacaagccgttgtttaaccgagcggtgcgcgggcag
tatccaccgggctcgaccatcaagcagtttgtcgcactcgccggacttgctgagggggtg
acgacctcgcggcgtgcgacctattgcccaggggcgttcagcctgcctggacactcccat
cggtttcgctgctggcgtcgcggcggccatggtgccttgagcttggagcaagcactggtg
cagtcctgcgacgtctacttctacgatctggccaaccggttggggatcgaccgactctcg
ggctttctctcggacttcggtttcggcgccttgaccggaatcgatgtcgccggcgagctg
ggcggactgatgccgacgcgtgactggaagcgacgggtgcgcaaacaggcctggtatccc
ggcgagaccctgatcgtcggtatcgggcagggctctttcctggcgacgccgctgcaattg
gccgtcgccacagcggcggtcgccaatcacggcaaggtcattcgccctcaggtcgcgcgt
gccgctcaggctcccggtgcgtctgctgccgagcagttgccgatggtctcgcacaccatc
gatcttgccgacgaacatcaatgggatctgatcatcgacgcgatggccaaggtcgtcgaa
tccggcaccgcccggcgcatccgcagtaccgaataccgcatcgccggtaagacggggacc
tcgcaggttttcagccttggtcagaatcagcgctacaacgcggcgacgctccccaagcat
ctcaaggaccacgccctgttcgttgcgttcgcgccggtcgaggatccgcgcatcgcgctt
gctgtcatcgtcgagaacggtggcgggggcggcgccactgcggcacccgtcgcgcgtcgc
attatggatgcctatctcggcgtcgcgaacgagccgagcgagccgagtgatgccggaggc
gggcgtggcgactag
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