Thiocapsa bogorovii: LT988_11560
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Entry
LT988_11560 CDS
T07840
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K04033
AraC family transcriptional regulator, ethanolamine operon transcriptional activator
Organism
tbog
Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tbog03000
]
LT988_11560
Transcription factors [BR:
tbog03000
]
Prokaryotic type
Helix-turn-helix
AraC family
LT988_11560
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GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_11
HTH_23
HTH_29
HTH_17
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
UHD18621
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Position
2551765..2552760
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AA seq
331 aa
AA seq
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MQRDRTRPRETTAGTGVPTLIAEASIATNDVDELFSWAHGWDFEIFQLSPGPLGYRSRTV
QLPGLRLNWECSAQRLRGRHRMRQDSLFVSLAIAAVRPPVWKGCAVAANQLLVFGADEHE
LVTPEGMRGLNIEVAPALLDAWGLQAPPGGLLDIAPAAMGRLLIACRRARDLIGEAAEPP
TATAVHAAREHILGRLIEALLSGGGVAVAPVAVMSTSDARRFGLVKRAEAAALRSGPEFD
VAELADELHTSRRTLHRAIKDWSGIGPQAYFQILRLHRFRRRLLLGRSDEPITAVAYSLG
FENMGRLAQLYRRFFGELPSQTRGHVKQLIR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgcgatcgcacgcggccgcgcgagacaactgcgggaacgggagtaccgacactg
atcgccgaagcatcgattgcgacgaacgacgtcgacgaactgttttcctgggcacatggc
tgggacttcgagatcttccaactctctccgggaccgctgggttatcgctcccgcaccgtc
cagctccccgggctgcggctgaattgggagtgcagcgcgcaacgtctgcggggtcgccac
cggatgcggcaggactcactgttcgtctcgctggcgatagcggcggtgcgcccgccggtg
tggaagggatgcgcggtggcggcgaatcagctcctagtcttcggggccgacgagcatgag
ctcgtcacgcccgaaggcatgcgcggcctaaacatcgaggttgccccggcgctgctggac
gcctggggattacaggcaccccccggcggtttgctggacatcgcgcccgcggcgatgggt
cggctgttgatcgcctgtcggcgtgcacgcgacctgattggtgaggccgcggaaccccca
accgcgacggccgtccatgccgctcgcgaacacatccttgggcgcctgatcgaggccctg
ctgagcggcggcggggtcgctgtcgcgccggttgccgtcatgtcaaccagcgatgcccgc
cgattcggccttgtcaaacgcgccgaggcggcagcgctacgatccggccccgagttcgat
gtggcggaattggcggacgaactgcacacctcgcggcgcaccctgcaccgggcgatcaag
gactggtccgggatcgggccgcaggcctacttccagatcctaaggctgcatcgatttcgc
cgtcgactcctgctcgggcgttccgacgaacccatcaccgccgtggcttactcactgggt
ttcgagaacatgggccgactcgcccaactctaccgccgcttcttcggcgagctgcccagc
cagacacggggtcatgtcaagcagttgatccgctga
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