Thiocapsa bogorovii: LT988_11590
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Entry
LT988_11590 CDS
T07840
Name
(GenBank) glycine betaine ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LT988_11590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tbog02000
]
LT988_11590
Transporters [BR:
tbog02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
LT988_11590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
SBP_bac_3
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UHD18627
LinkDB
All DBs
Position
2564332..2565192
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AA seq
286 aa
AA seq
DB search
MIDKYAVAALAALAAVGTSALAADKGDVELAYVEWSSEVASTNLVKAVLEDMGYDVKITP
VSAAAMWQAVGSGDVDGLVAAWLPTTHNHYLEQVSDKVVDLGPNLVGTRIGLVVPAYVEI
DSIEDLEGAAERFDGKIIGIDPGAGLMSKTETVLEDYDITDLTLVEGTGPIMTAVLGDAI
EKEEWVVVTGWTPHWMFAQYDLKYLDDPKGIYGGEEEIHTIVREGLKEDLPEVYAVLDNF
SWTPDQMAELMVMNQERRADPLKNAKLWIAEHPDVVASWMPDNERE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacaagtacgcagttgcagcgcttgcggcgctcgccgcggtcgggacctcggca
ctcgccgcggacaagggcgacgtcgagctggcctatgtcgagtggtccagcgaggtagcc
agcaccaatctcgtgaaggccgtgctcgaggacatgggatacgacgtgaagatcaccccg
gtctcggccgcggccatgtggcaggccgtgggcagcggcgatgtcgacgggctcgtcgcc
gcctggttgccgaccacccacaaccactacctcgagcaggtctcggacaaggtcgtggac
ctcggtcccaacctcgtcgggacccggatcggcttggtcgttcccgcctatgtcgagatc
gactcgatcgaggatctcgagggcgcggccgaacgtttcgacggcaagatcatcgggatc
gatccgggggccggtctgatgagcaagaccgagacggtgctcgaggactacgacatcacg
gatctgacattggtcgagggcaccgggcccatcatgaccgccgttctgggcgatgccatc
gagaaggaagaatgggtcgtggtgaccggctggacgccccactggatgttcgcgcaatac
gatctgaagtacctcgacgacccgaaaggcatctacggcggcgaagaggagattcacacc
atcgtccgcgaaggtttgaaggaagacctgccggaggtctatgccgtcctggacaacttc
agctggacgccggatcagatggccgagctgatggtgatgaatcaagaacgacgcgccgat
ccactgaagaacgcgaagctctggatcgcggagcatccggatgtcgtcgcgtcctggatg
cccgacaacgagcgcgaatag
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