Thiocapsa bogorovii: LT988_12730
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Entry
LT988_12730 CDS
T07840
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
tbog
Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tbog03016
]
LT988_12730 (mnmE)
Transfer RNA biogenesis [BR:
tbog03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LT988_12730 (mnmE)
Prokaryotic type
Methyltransferases
LT988_12730 (mnmE)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
ABC_tran
RsgA_GTPase
AAA_29
AAA_28
Guanylate_kin
Motif
Other DBs
NCBI-ProteinID:
UHD18841
LinkDB
All DBs
Position
complement(2811504..2812844)
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AA seq
446 aa
AA seq
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MATETIVALATPSGMGGVGIVRISGARVASIAEAVLGKLPSPRQATFATFRDAHGNFIDE
GIALYFSAPASFTGEDVLELQGHGGPVVMDLLLQRCLHLGARLARPGEFSERAFLNGKLD
LAQAEAVADLIESSTALAVRLAGRSLQGVFSRRVDDLIERLVRMRTYIEATLDFPDEELD
LATDLGISEDLRAMIDETREVMGSARQGQVIREGLAVVIAGPPNAGKSSLLNALSGQDAA
IVTPIPGTTRDLLKLDIQVDGLPIRIVDTAGLRRTEDPIEREGVRRARAELDQADLVLWV
HDADAGAEDTPAPESLPQQVPVTRVRNKIDLRGLSPGIAELETGPQISLSVKTGAGLDLL
RAHLRDRAGLGGSTEGAFVARRRHLGALRLGLDHLASAQRALEQGAGAELVADDLLQAQH
AFGEITGRFTSEDLLGRIFSTFCIGK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggccacggagaccatcgtcgcactggcgaccccgtccggaatgggcggggtcgggatc
gtgaggatcagcggtgctcgcgtcgcgtccatcgcggaggccgtgctcgggaagttaccc
tctcccaggcaggccaccttcgcgaccttccgcgatgcgcacggaaacttcatcgacgaa
ggcatcgccctctatttctcggcgccggcctcctttacgggagaggatgtcctcgagctt
cagggccacggcggtccggtcgtcatggacctgctcctgcaacgctgtttgcacctcggg
gcacggctcgctcgccccggtgagttctcggagcgcgccttcctgaacggtaagctcgat
cttgcccaagcggaggccgtcgccgacctgatcgagagctccaccgcactcgcggttcga
ctcgccggtcgcagcctccaaggcgtcttctcgcgacgggtcgatgacctcatcgagcgt
ctcgtccggatgcggacctacatcgaagcgaccctcgattttcccgacgaggagttggat
cttgcgaccgatctcgggatttccgaggatcttcgggcgatgatcgacgagacccgcgag
gtcatgggctcagcgcgccaaggtcaggtcattcgggagggcctcgcggtcgtgatcgcg
ggtcccccgaacgccggtaaatcgagtttactcaatgcgttgtccggtcaggatgcggcg
attgtcacaccgatcccgggcaccacgcgcgatcttttgaagctcgacatccaggtcgac
gggctcccgatccgtatcgtggatacggctggtctgcgccggaccgaggatccgatcgag
cgcgagggcgtgcgccgcgcgcgcgccgagctcgaccaagcggacctcgttctctgggtc
catgatgccgacgccggagcggaggataccccggcacccgaaagcctaccgcaacaggtc
ccggtgacccgggtgcgcaataagatcgaccttcgcggtctctcgcccggtatcgcggag
cttgagacaggtccgcagatcagcctttccgtcaagaccggtgcaggcctcgacctgctg
cgcgcgcatctgagggatcgcgcgggccttggcggctccaccgaaggtgccttcgttgcg
cgtcgtcgccatctcggcgccctgcgcctcggtctcgaccatctcgcatccgcacagcgc
gcccttgagcaaggagccggcgccgagcttgtggcggatgatcttctgcaagctcagcat
gcattcggcgagatcaccgggcgtttcacctccgaggatctcttgggacgcatcttctcc
acattctgtattggaaagtag
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