Thiocapsa bogorovii: LT988_13425
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Entry
LT988_13425 CDS
T07840
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00300
Lysine biosynthesis
tbog00470
D-Amino acid metabolism
tbog01100
Metabolic pathways
tbog01110
Biosynthesis of secondary metabolites
tbog01120
Microbial metabolism in diverse environments
tbog01230
Biosynthesis of amino acids
Module
tbog_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LT988_13425 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LT988_13425 (lysA)
Enzymes [BR:
tbog01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LT988_13425 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UHD14308
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Position
complement(2960299..2961549)
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AA seq
416 aa
AA seq
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MDHFNYRDDVLYAEDVPLADIAARFGTPCYVYSRATLERHWRAFDRAFRDHPHLVCFAVK
ANSNLAVLNVLARLGSGFDIVSLGELERVLAAGGDPAKVIFSGVGKREDEIRFALEVGIR
CFNVESESELIRLDRIAGEMGVVAPVSLRVNPDVDAQTHPYIATGLKENKFGIDIHAAEE
VYVRAAALPNLRVIGIDCHIGSQLTDLAPFIDALGRVLTLAERLGEIGIPIAHLDIGGGL
GIRYTEEHPPEPAAYAAAMSYQLGDRPYEILLEPGRAIAGNAGVLLTRVEYLKENGTRHF
AILDAAMNDLVRPALYQAVQDIVPVIHDTEAEPARYDLVGPVCETGDFLGKGRQLALREG
DLLAVRGSGAYGFTMSSNYNSRPRVPEVMVDGDHVHLVRERETVASLYAGESVLPS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatcacttcaattatcgcgacgatgtcctctacgccgaggatgtcccgctcgccgac
atcgccgcgcgtttcggtacgccctgttatgtctattcccgtgcgacgctggagcgccat
tggcgcgccttcgaccgcgccttccgcgatcatccgcacctggtctgcttcgccgtcaag
gccaactccaatctggcggtgctgaacgtcctggcgcgcctgggctcggggttcgacatc
gtctcgctcggcgagctcgagcgcgtgctcgccgccgggggcgacccggccaaggtgatc
ttctccggggtcggcaagcgcgaggacgagatccgcttcgccttggaggtcggcattcgc
tgcttcaacgtcgagtcggagtccgagctgatccggctcgatcgcatcgccggggagatg
ggtgtggttgcgcccgtgtcgctgcgggtgaatcccgacgtcgacgcgcagacccacccc
tacatcgccaccggcctgaaggagaacaagttcgggatcgacatccacgcggccgaagag
gtctatgtgcgggccgcggccctgccgaacctgcgggtgatcggcatcgactgtcatatc
gggtcgcagctcacggatctggcccccttcatcgacgcgctcgggcgcgtgctgaccctg
gccgagcggctcggcgagatcggcatcccgatcgcgcatctcgacatcggcggcggactc
ggcatccgctacaccgaagagcatcccccggaacccgccgcctatgccgcggccatgagc
taccagcttggcgatcgcccctacgagatcctcctggagccgggccgcgccatcgccggc
aacgccggcgttctactgacccgcgtggaatatctcaaggagaacggcacgcgtcacttc
gcgatcctggatgcggcgatgaatgacctggtgcgccccgcactctatcaggccgttcag
gacatcgtgccggtgatccacgacaccgaggcggagccggcccgctatgatctggtcggt
ccggtctgcgagaccggggacttcctcggcaagggccggcagctggcgttgcgcgagggc
gacctgctcgccgtgcgcggctcgggcgcctacggcttcaccatgagctccaactacaat
agtcgcccgcgcgtacccgaggtcatggtcgacggcgaccacgtgcatctagtgcgcgag
cgcgagaccgtcgcgagcctttacgccggggagtccgttctaccgtcatga
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