KEGG   Thiocapsa bogorovii: LT988_13425
Entry
LT988_13425       CDS       T07840                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
tbog  Thiocapsa bogorovii
Pathway
tbog00300  Lysine biosynthesis
tbog00470  D-Amino acid metabolism
tbog01100  Metabolic pathways
tbog01110  Biosynthesis of secondary metabolites
tbog01120  Microbial metabolism in diverse environments
tbog01230  Biosynthesis of amino acids
Module
tbog_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:tbog00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LT988_13425 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LT988_13425 (lysA)
Enzymes [BR:tbog01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     LT988_13425 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: UHD14308
LinkDB
Position
complement(2960299..2961549)
AA seq 416 aa
MDHFNYRDDVLYAEDVPLADIAARFGTPCYVYSRATLERHWRAFDRAFRDHPHLVCFAVK
ANSNLAVLNVLARLGSGFDIVSLGELERVLAAGGDPAKVIFSGVGKREDEIRFALEVGIR
CFNVESESELIRLDRIAGEMGVVAPVSLRVNPDVDAQTHPYIATGLKENKFGIDIHAAEE
VYVRAAALPNLRVIGIDCHIGSQLTDLAPFIDALGRVLTLAERLGEIGIPIAHLDIGGGL
GIRYTEEHPPEPAAYAAAMSYQLGDRPYEILLEPGRAIAGNAGVLLTRVEYLKENGTRHF
AILDAAMNDLVRPALYQAVQDIVPVIHDTEAEPARYDLVGPVCETGDFLGKGRQLALREG
DLLAVRGSGAYGFTMSSNYNSRPRVPEVMVDGDHVHLVRERETVASLYAGESVLPS
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggatcacttcaattatcgcgacgatgtcctctacgccgaggatgtcccgctcgccgac
atcgccgcgcgtttcggtacgccctgttatgtctattcccgtgcgacgctggagcgccat
tggcgcgccttcgaccgcgccttccgcgatcatccgcacctggtctgcttcgccgtcaag
gccaactccaatctggcggtgctgaacgtcctggcgcgcctgggctcggggttcgacatc
gtctcgctcggcgagctcgagcgcgtgctcgccgccgggggcgacccggccaaggtgatc
ttctccggggtcggcaagcgcgaggacgagatccgcttcgccttggaggtcggcattcgc
tgcttcaacgtcgagtcggagtccgagctgatccggctcgatcgcatcgccggggagatg
ggtgtggttgcgcccgtgtcgctgcgggtgaatcccgacgtcgacgcgcagacccacccc
tacatcgccaccggcctgaaggagaacaagttcgggatcgacatccacgcggccgaagag
gtctatgtgcgggccgcggccctgccgaacctgcgggtgatcggcatcgactgtcatatc
gggtcgcagctcacggatctggcccccttcatcgacgcgctcgggcgcgtgctgaccctg
gccgagcggctcggcgagatcggcatcccgatcgcgcatctcgacatcggcggcggactc
ggcatccgctacaccgaagagcatcccccggaacccgccgcctatgccgcggccatgagc
taccagcttggcgatcgcccctacgagatcctcctggagccgggccgcgccatcgccggc
aacgccggcgttctactgacccgcgtggaatatctcaaggagaacggcacgcgtcacttc
gcgatcctggatgcggcgatgaatgacctggtgcgccccgcactctatcaggccgttcag
gacatcgtgccggtgatccacgacaccgaggcggagccggcccgctatgatctggtcggt
ccggtctgcgagaccggggacttcctcggcaagggccggcagctggcgttgcgcgagggc
gacctgctcgccgtgcgcggctcgggcgcctacggcttcaccatgagctccaactacaat
agtcgcccgcgcgtacccgaggtcatggtcgacggcgaccacgtgcatctagtgcgcgag
cgcgagaccgtcgcgagcctttacgccggggagtccgttctaccgtcatga

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