Thiocapsa bogorovii: LT988_13480
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Entry
LT988_13480 CDS
T07840
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LT988_13480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbog03400
]
LT988_13480
Enzymes [BR:
tbog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LT988_13480
DNA repair and recombination proteins [BR:
tbog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LT988_13480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
Zn_ribbon_PriA
ResIII
Helicase_C
AAA_30
PriA-like_WH
HypA
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
UHD14317
LinkDB
All DBs
Position
complement(2968516..2970816)
Genome browser
AA seq
766 aa
AA seq
DB search
MPPAPIRKPGPILRVAVAAPLMDAFDYLMPSPASDDSSATPSLSPGQRVLVPFGRSRRVG
ILLELRDTSDQDPARLKPIERLLDPRPVLSAADLTLIRWAADYYRQPIGEALFSALPARL
RRAMPIMDEQIPGVSATLAGRTLDLDTLRRAPKQRELLTLVRSVPEGIAVADLNARLGPC
AATLRSLRARGLLETCRLTPAGPVTQTSGAEPEPGPELNADQTEALRRVAAGLGGFSPFL
LDGVTGSGKTEVYIRLIEAAAARGAQTLLIVPEIGLTPQLRERLASRLPDPPAVLHSGLA
AGDRERAWHRAASGHAGVVLGTRSAVFVPLPRLGLILVDEEHDASLKQQEGFRYSARDLA
VRRAQLVGCPVVLGSATPSLETLNNAQTARYGWLRLPQRAGAACTPRTSLLDIRNQPLQA
GLSAVLREEMRTEIAAGNQVLLFLNRRGYAPVLTCHACGWVGECPHCDARLTLHLARRRL
WCHHCGWTRPLPDTCPDCKGTDLRMLGRGTERLDEELRPLFPGVGIARLDRDTTRRRGEL
ARLLDEVRRGEVQILLGTQMLAKGHDFPGVTLVGILDLDQSLYASDFRAPERTAQLIVQV
TGRAGRAERPGRVVLQTRHPEHPLLQSLLREGYTGFATTALAERREAELPPFSHLVLLRA
EAPTAETATAFLNQARLIAEGLAEGQEEELNEGPAERRAETGVQCYGPVPAPMERRGGRY
RAQLLIQSSRRPRLQRFLASWSRALRALPRSKGLRWSLDVDPQDMY
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
gtgccacccgccccgatcagaaagcccggtccgatcctgcgtgtcgccgtcgcggcgccg
ctgatggatgcgttcgattatctgatgccatctccggcatcggacgactcctcggcaacg
ccgtcactgtcgcccggtcagcgcgtgctggtgcccttcggccgaagtcggcgcgtgggc
atcctgctcgagctgcgcgacacctccgatcaggatcccgcccgtctgaagccgatcgag
cgcctgctcgatccgcggcccgtcctgagcgcagccgacttgaccctgatccgttgggcg
gcggactactaccggcaaccgatcggcgaggccctcttcagcgcgctccccgcccgtctg
cgccgagccatgcccatcatggacgagcagatcccaggcgtctcggcgacactggccggt
cgaacactggatctcgacacactgcggcgagccccgaagcagcgcgagcttctgaccctg
gtcaggtccgtacccgagggcatcgcggtggccgatctgaacgcacgccttggcccctgt
gcggcgacgctgcgcagcctccgtgcacgcggcctgctggagacctgccgcctcacgccg
gcgggacccgtcacccagacctcaggcgccgagcccgaacccggtcccgagctcaatgcg
gatcagaccgaggcgcttcgtcgggtcgccgccgggctcggcggcttcagcccattcctg
ctcgatggcgtgaccggcagcggcaagaccgaggtctacatccgcctgatcgaggccgcc
gccgcccgcggcgcccagaccctcctgatcgttcccgagatcggcctgaccccgcagttg
cgcgagcgcctggcctcgcgactgcccgacccgcccgctgtcttgcattccgggctcgcc
gccggagaccgcgagcgagcctggcaccgcgccgcctccggacacgcaggcgtcgtgctc
gggacgcgctcggcggtgttcgtgcccctgccgcgcctcgggctgatcctggtcgacgag
gagcatgacgcctcgctcaagcagcaggagggattccgctactcggcacgggatctcgcc
gtgcgacgcgcccagctggtcggttgcccggtcgtgctcggctcggcgacaccctcgctc
gagacgctcaacaacgcgcagaccgcccgctacggctggttgcgcctgccccagcgcgcg
ggcgccgcctgcacgccgcggacctcgctgctggatatccgcaatcagccgctccaggcc
gggctctccgcggtcctgcgcgaagagatgcgcaccgagatcgccgccggcaatcaggta
ctcctctttctgaaccgtcgcggctatgccccggtgctcacctgtcacgcctgcggttgg
gtcggcgaatgcccgcactgcgacgcgcgcctcaccctccacctggcccgccgacgcctc
tggtgtcaccactgcggttggactcggccgctgcccgacacctgtccggactgcaaaggg
acggatctgcgcatgctcggacgcggcaccgagcgactcgacgaggagctgcgccccctg
tttccgggcgtcggcatcgcccggctcgaccgcgacaccacccggcgtcgcggcgagctg
gcacgcctgctggacgaggtccggcgcggcgaggtgcagatcctgctcggcacgcagatg
ctggccaaagggcacgacttccccggcgtgaccctggtcgggatcctggatctcgaccaa
tcgctctacgcaagcgatttccgcgcaccggaacgcaccgcgcaactgatcgtgcaggtc
accggacgcgcaggacgtgccgagcgccccgggcgagtggtccttcagacccgccacccc
gagcaccccctgctacaaagcctcttgcgcgagggttacacgggcttcgcgaccacggcc
ctcgccgagcggcgcgaggccgagctaccgccgttcagccatctcgtgctgctgcgcgcc
gaggccccgaccgccgaaaccgcgacggccttcttgaatcaggcccgcctcattgcagaa
gggcttgcagaagggcaggaggaggaactcaacgagggccctgccgaacggcgcgccgag
accggagtgcagtgctacggcccggtcccggcgccgatggagcgccgcggtgggcgctac
cgcgcccagcttctgatccaatcctcccgacgtccgcgactccagcggtttctggccagc
tggagccgcgccctgcgggctttacccagaagcaaaggactgcgctggtcgctggacgtg
gatccgcaggatatgtactga
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