Thiocapsa bogorovii: LT988_15570
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Entry
LT988_15570 CDS
T07840
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LT988_15570 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbog03400
]
LT988_15570 (ruvB)
Enzymes [BR:
tbog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LT988_15570 (ruvB)
DNA repair and recombination proteins [BR:
tbog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LT988_15570 (ruvB)
RecFOR pathway proteins
LT988_15570 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
nSTAND3
Mg_chelatase
AAA_16
TIP49
AAA_22
AAA_14
Rad17
ABC_tran
RNA_helicase
NTPase_1
NB-ARC
AAA_18
Bac_DnaA
NACHT
AAA_28
AAA_19
AAA_24
AAA_17
NPHP3_N
AAA_33
Sigma54_activ_2
TsaE
IstB_IS21
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
UHD14702
LinkDB
All DBs
Position
complement(3468124..3469179)
Genome browser
AA seq
351 aa
AA seq
DB search
MAKPERLIDADPASDELALDRAIRPRKLEDYVGQAVVREQMEIFIGAARGRGEALDHVLI
FGPPGLGKTTLAHIIAHEMQVNLRQTSGPVLEKPGDLAAILTNLDAGDVLFVDEIHRLSP
VVEEVLYPAMEDYQLDIMIGDGPAARSIKLDLPFFTLVGATTRAGLLTSPLRDRFGIVQR
LEFYNAEDLAWIVRRSARILAIETEAEGAAEIARRSRGTPRIANRLLRRVRDFAQVRADG
RITAEVADQALGMLKVDALGFDHMDRRLLDAVINKFDGGPVGVESLAAAIGEERGTIEDV
LEPFLIQQGYLMRTPRGRVATQAAYLHLGLKAPRSVVERAAIPDLFGVVSD
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcccgaacgtctgatcgacgccgacccggccagcgacgagctggcgctcgat
cgggccatccgcccgcgcaagctcgaggactatgtcggccaagcggtcgtgcgcgagcag
atggagatcttcatcggcgccgcgcgcggacgcggcgaggcgctggaccatgtgctcatc
ttcggcccgccggggctcggcaagaccacactcgcgcacatcatcgcgcacgagatgcag
gtcaatctgcgtcagacctccgggcccgtactcgagaagccgggcgatctcgcggccatc
ctgaccaatctcgatgcgggggatgtgctcttcgtcgacgagatccatcgcctcagcccg
gtggtcgaggaggtgctctatccggcgatggaggactatcagctcgacatcatgatcggc
gacggcccggccgcgcgctcgatcaagctggatctgccgttcttcaccctggtcggcgcg
accacgcgggccgggctcctgacctcgcctctgcgcgaccgcttcgggatcgtgcagcgt
ttggagttttacaacgccgaagacctggcctggatcgttcgccgctcggcgcgcatcctc
gccatcgagaccgaggccgagggcgccgccgagatcgcgcgacgctcgcgcggcacgccg
cgcatcgccaaccggctcctgcgccgggtgcgcgatttcgcccaggtgcgggccgacggg
cgcatcaccgccgaggtcgccgaccaggcgctcgggatgctcaaggtcgacgcgctgggt
ttcgaccacatggaccgccggctgctcgatgccgtcatcaacaagttcgacggcgggccg
gtgggcgtggaaagcctcgccgcggcgatcggcgaggagcgcggcaccatcgaggacgtc
ctcgagcccttcctgattcagcaaggctatctgatgcgcaccccgcgggggcgggtcgcc
acgcaggcagcctatcttcatcttgggctgaaagcgccgcggagcgtcgtcgagcgtgcg
gccataccggatcttttcggggtcgtctcggattaa
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