Thiocapsa bogorovii: LT988_16135
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Entry
LT988_16135 CDS
T07840
Symbol
kaiC
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
tbog
Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
LT988_16135 (kaiC)
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
EAL
IstB_IS21
RecA
AAA_16
DnaB_C
SLFN-g3_helicase
AAA_7
nSTAND3
AAA
AAA_22
NACHT
PAXNEB
PhoH
CbiA
AAA_24
AAA_5
ArsA_ATPase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UHD14810
LinkDB
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Position
complement(3603117..3605393)
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AA seq
758 aa
AA seq
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MTDRRNGNPGSASSATLPPIGQNTVDGVRVRAAEALDSGRFDLADEILAGIASTAKRCNW
PNLKRLPLNRPNGNKSFVERHGEDRDDEAIARAVIALGRSLGLGVIAEGIETRAQHDFLR
NEFCDEGQGYLYGRSLATSAFLESWSVTDTGERLSADPSPNPTPDNISNRAMRRESPVAM
TIPRSNVGVPASNSAEESMQRHPVPTGIEGLDFVLQGGLPSGRPTLLRGAAGTGKTVIAL
TFLCQGIAAGETAVFVTFDEAPEALLGHAEGFGFPARRYLAEGRLRILDMRPDRNDVLVG
ETIELTAILARIGFALDSLGATRLVMDAVDGMETGFADLPSLRGELTHVFDWIRDRAVTC
LITVGEYADFSTRYGLEDYIADCVIALTQEVNNRVMTRVLRVVKRRGAAHGSNENPFLLD
RGGIFLVPVTGSVLSAKVSDARLSTGIPGLDAMLGGQGPYRGSITLLSGQAGTGKTSIAC
SFARAACEAGLSTLYISFEESLDELIRNQHSIGIDLARYHRTDSRAVDGLGALLLQPVRA
VELGLEEHLMRVIRSVRQHRPALVILDPVSGLAGRSRDPVAKEMLLRLLYLIKEEGVTTV
ATELLGDDSSGVSHLDVSSIIDVWIKLRRHENNGEMNRLITVVKARGLPTSDQVKEFRMG
SDGLRIVDPYLGEGGIVYGTARMARQAEDEETMAQLHLDLERARQMRAELSEIQAANERL
ARAEHEVKTADLDRQVAQIERRLAGVERTRAAVGRGRT
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccgtcgcaacggcaacccgggaagcgcgagcagtgccaccctgccgccaatc
ggacagaacactgtcgatggcgtgcgcgtgcgcgcggccgaggccctcgacagcggacgc
ttcgatctcgccgacgagatcctggccggcatcgcatcgacggccaagcgctgcaattgg
ccaaacctgaaacggcttcccctgaatcgaccgaatgggaacaagtcattcgtggagcgg
cacggcgaggatcgcgacgacgaggcgatcgcccgcgccgtgatcgccttggggcgcagt
ctcggactcggggtcatcgccgagggcattgagacacgcgcgcagcatgatttcctacgc
aacgaattctgtgacgaagggcagggttacctgtatggtcgatccttggcgacaagtgct
ttcctggagagttggtccgtgacggatacaggcgagcgcctgtcggcggatccgagcccg
aacccgactcccgataacatttcaaacagggctatgagaagagaatcaccggtcgccatg
accatacccaggagcaacgtcggcgtccccgcatcgaactcggccgaagagtccatgcag
aggcatccggtccccaccggaatcgaagggctcgacttcgtcctccaaggtggtctcccg
tccgggcgacccaccttgctgcgcggcgcggcgggcaccggcaagaccgtcatcgcgctg
acctttctctgccaagggatcgcggcaggcgagaccgcggtcttcgtgaccttcgacgag
gccccggaagcgctcctcggccacgccgagggcttcggctttcccgcccggcgctatctg
gccgaaggacgtctgcgcatcctggacatgcgtccggatcgcaacgatgtgctagtcggc
gagaccatcgagctcaccgctatcctcgcccgcatcggtttcgcgctggatagtctgggt
gcgacccgtctggtgatggacgccgtcgacggcatggaaaccggttttgccgatctgccc
agcctgcgcggcgagctgacgcatgtcttcgactggatccgcgatcgcgccgtgacctgc
ctcattacggtcggcgaatatgccgacttcagcacccgctacggactcgaggactatatc
gccgattgcgtgatcgccctcacccaagaggtcaacaaccgggtgatgacgcgcgtactg
cgcgtggttaaacgccgaggtgcggcgcacggctccaacgaaaatcccttcctgctcgat
cgcggcgggatcttcctggtcccggtcaccggctccgtcctcagcgccaaggtgtccgac
gcgcgtctctccacgggtatccccggtctcgacgccatgctgggcggccaaggtccctat
aggggttcgatcacgctgctgtccggccaagccggcaccggcaagacgagcatcgcctgc
agctttgcccgcgccgcctgcgaggccgggctgtcgaccctctacatcagcttcgaggag
agcctggacgagctgatccgcaaccagcacagtatcggcatcgacctcgcccgctatcac
cgcacggacagccgcgcggtcgacgggctcggcgccctgctgcttcagccggttcgcgcg
gtggagctgggtctggaggagcatctgatgcgcgtcatccgctcggtgcgacagcatcgc
ccggcgctcgtcatcctggacccggtcagcggtttggccggtcgcagccgcgatccggtc
gccaaggagatgctgctgcgcctgctctatctgatcaaggaagaaggcgtcaccacggtg
gcgaccgagctgctcggcgacgacagctcgggcgtcagtcatctggatgtctcctccatc
atcgacgtctggatcaagctgcgccgacacgaaaacaacggtgagatgaaccgcctgatc
acggtcgtgaaggcccgcggcttgcccacatcggaccaggtcaaagagtttcggatgggc
agcgacgggctgcggatcgtcgacccctatctcggcgagggcggcatcgtctacggcacc
gcgcgcatggcgcgtcaggcggaagacgaggagacgatggcccaactgcacctcgacctc
gagcgcgcacgccaaatgcgcgccgagctgagcgagatccaggcggccaacgagcgtctg
gcgcgggccgagcatgaggtcaagacggccgatctcgaccgtcaagtcgcccaaatcgag
cgccgcctagcgggtgtcgagcgcacgcgcgccgcggtcggacgagggcgcacatga
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