Thiocapsa bogorovii: LT988_16905
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Entry
LT988_16905 CDS
T07840
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
tbog
Thiocapsa bogorovii
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tbog03032
]
LT988_16905
03036 Chromosome and associated proteins [BR:
tbog03036
]
LT988_16905
03400 DNA repair and recombination proteins [BR:
tbog03400
]
LT988_16905
DNA replication proteins [BR:
tbog03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LT988_16905
Chromosome and associated proteins [BR:
tbog03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LT988_16905
DNA repair and recombination proteins [BR:
tbog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LT988_16905
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
CATASP
Motif
Other DBs
NCBI-ProteinID:
UHD14949
LinkDB
All DBs
Position
3781093..3781434
Genome browser
AA seq
113 aa
AA seq
DB search
MTKSELIDVLAAAQDHLPYKDVEEAVRKTLDRMSTALASGERIEIRGFGSFSLHYRPPRI
GRNPKTGDSVALAGKHVPHFKPGKELRDRVNQAFQDEQGTQEEERIPLAAASR
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcagaactgatcgacgtactggcggcggcgcaggaccaccttccctacaaa
gacgtggaggaggcggtacgaaagaccctcgatcgcatgagtactgcacttgcctccggc
gagcggatcgagatccgaggtttcggaagcttttcgttgcactaccggccgccccggatc
gggcgtaacccgaagaccggcgactcggtcgccttggccgggaagcatgtcccccatttc
aagcccggcaaggagctccgggaccgcgtcaaccaagcgtttcaagacgagcagggcacg
caggaagaagagcgcatcccgcttgcggcggcctctcgctga
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